@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0030: (2015-12-11 )
MTFEMLYSKIHRATITDANLNYIGSITIDEDLAKLAKLREGMKVEIVDVNNGERFSTYVILGKKRGKICVNGAAARKVAIGDVVIILAYASMNEDEINTHKPSIVLVDEKNEILEKG

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NSN_A_9(1UHE)
?
[Raw transfer]



NSN_A_9(1UHE)
?
[Raw transfer]



NSN_A_9(1UHE)
?
[Raw transfer]



FMR_B_4(2EEO)
?
[Raw transfer]



CHAIN_B_1(1UHE)
?
[Raw transfer]
-
CHAIN_B_1(1UHE)
?
[Raw transfer]
-
CHAIN_B_1(1UHD)
PAND_HELPY
[Raw transfer]
-
2 PsiBlast_PDB 91.2897%-118 - C1 -1UHE 20.2 ?
53 HHSearch 90.7198%-120 - C1 -1UHE 20.2 ?
9 PsiBlast_PDB 85.6839%-129 - C1 -1PYQ - PAND_ECOLI -
22 PsiBlast_CBE 85.3039%-128 - C1 -1PYQ - PAND_ECOLI -
23 PsiBlast_CBE 85.2738%-132 - C1 -1PT1 - PAND_ECOLI -
49 HHSearch 85.1351%-125 - C- -2C45 - PAND_MYCTU -
3 PsiBlast_PDB 84.8350%-125 - C- -2C45 - PAND_MYCTU -
10 PsiBlast_PDB 83.6838%-118 - C1 -1PT1 - PAND_ECOLI -
11 PsiBlast_PDB 83.1939%-116 - C1 -1PT0 - PAND_ECOLI -
6 PsiBlast_PDB 82.9938%-123 - C1 -1PQE - PAND_ECOLI -
8 PsiBlast_PDB 81.7738%-123 - C1 -4AZD - ? -
5 PsiBlast_PDB 81.6438%-119 - C1 -4CS0 - PAND_ECOLI -
24 PsiBlast_CBE 81.3646%-145 - C1 -3OUG - PAND_FRATT -
21 PsiBlast_CBE 81.3438%-123 - C1 -4AZD - ? -
7 PsiBlast_PDB 81.1238%-121 - C1 -4CRZ - ? -
25 PsiBlast_CBE 80.7046%-143 - C1 -3OUG - PAND_FRATT -
27 PsiBlast_CBE 80.6446%-136 - C1 -3OUG - PAND_FRATT -
29 PsiBlast_CBE 79.7346%-144 - C1 -3OUG - PAND_FRATT -
28 PsiBlast_CBE 79.5846%-138 - C1 -3OUG - PAND_FRATT -
26 PsiBlast_CBE 79.1246%-140 - C1 -3OUG - PAND_FRATT -
14 PsiBlast_PDB 70.6245%-108 - C1 -2EEO 3.9 ?
1 PsiBlast_PDB 66.0497% -0 - C1 -1UHD 16.7 PAND_HELPY
39 Fugue 19.07100% 13 - C1 -1UHE Error ?
54 HHSearch 17.80100% 29 - C1 -1UHE Error ?