@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0206: (2015-12-13 )
MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWVLKGVYFDECLKKGKNHIITTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITADQVKEAITEKTALVSVMWANNETGLIFPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSGTLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRVHRVPNTTLISVRGIEGEAMLWDLNRSNIAASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAVRLRNISSSY

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLP_C_3(1ECX)
?
[Raw transfer]



PLP_C_3(1ECX)
?
[Raw transfer]



PLP_D_4(1ECX)
?
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_B_8(4EB7)
ISCS2_ARCFU
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_B_6(3LVJ)
ISCS_ECO57
[Raw transfer]



PLP_B_4(3VAX)
?
[Raw transfer]



PLP_A_3(3A9X)
SCLY_RAT
[Raw transfer]



PLP_B_7(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_A_3(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_B_8(3A9Y)
SCLY_RAT
[Raw transfer]



PLP_A_3(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_B_4(3A9X)
SCLY_RAT
[Raw transfer]



CYS_F_6(1ECX)
?
[Raw transfer]



PLP_A_3(3LVK)
ISCS_ECO57
[Raw transfer]



CYS_E_5(1ECX)
?
[Raw transfer]
1 PsiBlast_PDB 93.0943% -96 - C2 -3LVJ - ISCS_ECO57 -
21 PsiBlast_CBE 92.3643% -93 - C2 -3LVJ 3.4 ISCS_ECO57
87 HHSearch 91.8943% -97 * C2 *1EG5 4.1 ?
2 PsiBlast_PDB 91.1343% -94 - C2 -3LVK 2.9 ISCS_ECO57
110 Fugue 90.5943% -94 - C2 -1ECX 3.8 ?
111 Fugue 90.4938% -92 - C2 -4ISY - ISCSL_MYCTU -
7 PsiBlast_PDB 89.1137% -90 - C2 -4HVK - ISCS2_ARCFU -
6 PsiBlast_PDB 89.0837% -87 - C2 -4EB7 - ISCS2_ARCFU -
25 PsiBlast_CBE 88.6438% -90 - C2 -4ISY - ISCSL_MYCTU -
3 PsiBlast_PDB 88.6044% -94 - C2 -1ECX 3.9 ?
4 PsiBlast_PDB 88.4443% -92 - C2 -1EG5 4.1 ?
5 PsiBlast_PDB 88.4037% -90 - C2 -4EB5 - ISCS2_ARCFU -
23 PsiBlast_CBE 87.5737% -89 - C2 -4EB7 3.8 ISCS2_ARCFU
8 PsiBlast_PDB 87.0838% -90 - C2 -4ISY - ISCSL_MYCTU -
22 PsiBlast_CBE 86.9944% -93 - C2 -1ECX 4.1 ?
24 PsiBlast_CBE 86.7937% -94 - C2 -4EB5 - ISCS2_ARCFU -
27 PsiBlast_CBE 86.6838% -87 - C2 -4ISY - ISCSL_MYCTU -
26 PsiBlast_CBE 86.4538% -89 - C2 -4ISY - ISCSL_MYCTU -
9 PsiBlast_PDB 84.3434% -85 - C2 -3GZC - SCLY_HUMAN -
32 PsiBlast_CBE 83.6933% -88 - C2 -3GZD - SCLY_HUMAN -
30 PsiBlast_CBE 83.2335% -77 - C2 -3A9Y 2.8 SCLY_RAT
29 PsiBlast_CBE 83.2235% -77 - C2 -3A9Z 3.7 SCLY_RAT
31 PsiBlast_CBE 82.9935% -76 - C2 -3A9X 3.7 SCLY_RAT
11 PsiBlast_PDB 82.8735% -77 - C2 -3A9X 4.2 SCLY_RAT
12 PsiBlast_PDB 82.4335% -80 - C2 -3A9Z 3.8 SCLY_RAT
94 HHSearch 82.3836% -76 - C2 -3A9Z 3.8 SCLY_RAT
33 PsiBlast_CBE 78.4734% -82 - C2 -3VAX 3.5 ?
14 PsiBlast_PDB 78.0934% -84 - C2 -3VAX 3.4 ?
89 HHSearch 76.8933% -87 - C2 -3VAX 3.4 ?