@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0314: (2015-12-14 )
MAIVVTITSGKGGVGKSTTTANLAIGLAESGKKVVAVDFDIGLRNLDMILGLENRIVYDVVDVMEKNCNLSQALITDKKTKNLSFLAASQSKDKNILDKEKVAILINALRADFDYILIDSPAGIESGFEHAILHADMALVVVTPEVSSLRDSDRVIGIIDAKSNRAKSGEEVHKHLIINRLKPELVANGEMISIEEVLKILCLPLIGIIPEDHHIISATNKGEPVIRTDCESAKAYQRITRRILGEEVEYVEFKAKRGFFSALKGIFS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_6(3Q9L)
MIND_ECOLI
[Raw transfer]




ATP_A_4(3Q9L)
MIND_ECOLI
[Raw transfer]




ATP_B_6(3Q9L)
MIND_ECOLI
[Raw transfer]




ATP_B_6(3Q9L)
MIND_ECOLI
[Raw transfer]




ADP_C_11(3R9I)
MIND_ECOLI
[Raw transfer]




ADP_B_10(3R9I)
MIND_ECOLI
[Raw transfer]




ADP_B_6(3R9J)
MIND_ECOLI
[Raw transfer]




ADP_A_3(1G3Q)
?
[Raw transfer]




ADP_B_6(3R9J)
MIND_ECOLI
[Raw transfer]




ATP_B_6(3Q9L)
MIND_ECOLI
[Raw transfer]




ADP_B_10(3R9I)
MIND_ECOLI
[Raw transfer]




ADP_D_12(3R9I)
MIND_ECOLI
[Raw transfer]




ADP_D_12(3R9I)
MIND_ECOLI
[Raw transfer]




22 PsiBlast_CBE 97.7650%-111 - C2 -3R9I 7.4 MIND_ECOLI
21 PsiBlast_CBE 97.6350%-119 - C2 -3R9J 7.5 MIND_ECOLI
25 PsiBlast_CBE 97.1750%-108 - C2 -3Q9L 7.9 MIND_ECOLI
3 PsiBlast_PDB 97.1450%-120 - C2 -3R9J 2.9 MIND_ECOLI
2 PsiBlast_PDB 97.1150%-110 - C2 -3R9I 2.7 MIND_ECOLI
1 PsiBlast_PDB 96.8550%-107 - C2 -3Q9L 2.2 MIND_ECOLI
140 Fugue 96.4250%-105 - C2 -3Q9L 2.2 MIND_ECOLI
24 PsiBlast_CBE 96.3050%-113 - C2 -3R9I 7.6 MIND_ECOLI
23 PsiBlast_CBE 96.2350%-114 - C2 -3R9I 2.7 MIND_ECOLI
120 HHSearch 95.6250%-103 * C2 *3Q9L 2.2 MIND_ECOLI
5 PsiBlast_PDB 90.5047%-115 - C1 -4V02 - ? -
27 PsiBlast_CBE 88.3347%-115 - C1 -4V02 - ? -
26 PsiBlast_CBE 87.8947%-118 - C1 -4V03 - ? -
4 PsiBlast_PDB 87.5647%-118 - C1 -4V03 - ? -
9 PsiBlast_PDB 71.5925% -83 * C1 *4RZ2 - ? -
119 HHSearch 69.9232%-101 - C2 -1G3Q 8.8 ?
118 HHSearch 69.0230% -96 - C2 -1HYQ - ? -
6 PsiBlast_PDB 68.1333% -81 - C2 -1G3Q - ? -
8 PsiBlast_PDB 66.7333% -81 - C2 -1ION - ? -
11 PsiBlast_PDB 65.9425% -71 - C1 -4RZ3 - ? -