@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1015: (2015-12-20 )
MKKFAYSEPCLDEEDKKAVLEVLNSKQLTQGKYSLLFEEALCEFLGVKHALAFNSATSALLTLYRNFSDFNADRNEIITTPISFVATANMLLESGYTPVFAEVKNDGNIDELALEKLITKKTKAIVSVDYAGKSVEIESIQRLCKKYSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNNSELYEKMKLFRSHGMLKKDFFEGEVKSVGYNFRLNEIQSALGLSQLKKAPLLRQKREEVALIYDEIFKDNPYFTPLHPLLKHQSSNHLYPILMHQKFFTCKKLILESLHKLGILVQVHYKPIYQYQLYQQLFNTAPLKSAEDFYSAEISLPCHANLDLESVQNIAHGVLKTFEGFNRMGFI

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_E_5(2FNU)
PSEC_HELPY
[Raw transfer]



PMP_C_3(2FNU)
PSEC_HELPY
[Raw transfer]



PLP_B_4(2FNI)
PSEC_HELPY
[Raw transfer]



PMP_A_2(1MDO)
ARNB_SALTY
[Raw transfer]



CIT_A_3(4LC3)
?
[Raw transfer]



UD1_F_6(2FNU)
PSEC_HELPY
[Raw transfer]



UD1_D_4(2FNU)
PSEC_HELPY
[Raw transfer]



UD1_D_4(2FNU)
PSEC_HELPY
[Raw transfer]
21 PsiBlast_CBE 99.5291%-105 - C1 -2FNU 5.4 PSEC_HELPY
43 HHSearch 98.2191%-102 * C1 *2FNU 5.1 PSEC_HELPY
3 PsiBlast_PDB 97.9791%-103 - C1 -2FNU 5.2 PSEC_HELPY
23 PsiBlast_CBE 97.6991%-104 - C1 -2FN6 - PSEC_HELPY -
22 PsiBlast_CBE 97.4291%-105 - C1 -2FNI 4.5 PSEC_HELPY
2 PsiBlast_PDB 97.2291%-103 - C1 -2FNI - PSEC_HELPY -
1 PsiBlast_PDB 96.4591%-106 - C1 -2FN6 - PSEC_HELPY -
51 HHSearch 71.1028% -86 - C1 -1MDO - ARNB_SALTY -
8 PsiBlast_PDB 65.4728% -80 - C1 -4LC3 2.9 ?
50 HHSearch 65.1229% -82 - C1 -3DR4 - GDPPS_CAUCR -
6 PsiBlast_PDB 64.6130% -80 - C1 -3DR4 - GDPPS_CAUCR -
45 HHSearch 64.4526% -87 - C1 -3FRK - ? -
54 HHSearch 64.1625% -84 - C1 -2OGA - DESV_STRVZ -
20 PsiBlast_PDB 63.9826% -81 - C1 -4ZTC - ? -
55 HHSearch 63.9025% -87 - C1 -3UWC - ? -
7 PsiBlast_PDB 63.6731% -81 - C1 -1MDO - ARNB_SALTY -
5 PsiBlast_PDB 63.5531% -81 - C1 -1MDZ - ARNB_SALTY -
44 HHSearch 62.9825% -86 - C1 -1O69 - ? -
49 HHSearch 62.9625% -78 - C1 -3NYT - WBPE_PSEAE -
4 PsiBlast_PDB 62.6431% -85 - C1 -1MDX - ARNB_SALTY -
35 Fugue 60.5330% -77 - C1 -1MDO 4.6 ARNB_SALTY