@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1025: (2015-12-20 )
MQDKIIEILQISPIVPVVVVENIKDAVPLAQSLIEGGIPIIEVTLRSNCALEAIELIAKNVPKMRVGAGTILNLTQLEQAQNRGAEFLISPGLTIKLLEHAKKKDMPLIPGVSSSSEVMQALELGYNALKFFPAEYCGGVKLLNAFNGPFKGVKFCPTGGISADNMRSYLALENVVCVGGSWLTPKDLIQNKEWDKITEICKRALALR

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_D_4(1FQ0)
ALKH_ECOLI
[Raw transfer]



CIT_E_5(1FQ0)
ALKH_ECOLI
[Raw transfer]



CIT_F_6(1FQ0)
ALKH_ECOLI
[Raw transfer]



PYR_C_11(1EUA)
ALKH_ECOLI
[Raw transfer]



PYR_A_9(1EUA)
ALKH_ECOLI
[Raw transfer]



PYR_B_10(1EUA)
ALKH_ECOLI
[Raw transfer]



CIT_D_4(1FWR)
ALKH_ECOLI
[Raw transfer]



CIT_E_5(1FWR)
ALKH_ECOLI
[Raw transfer]



CIT_F_6(1FWR)
ALKH_ECOLI
[Raw transfer]



PYR_A_3(3VCR)
?
[Raw transfer]



PYR_A_3(3VCR)
?
[Raw transfer]
83 Fugue 97.2949%-139 - C1 -1FQ0 3.4 ALKH_ECOLI
65 HHSearch 96.5449%-136 * C1 *1WBH - ALKH_ECOLI -
67 HHSearch 94.1145%-135 - C1 -3VCR 2.6 ?
63 HHSearch 93.1341%-136 - C1 -1MXS - ALKD_PSEPU -
9 PsiBlast_PDB 92.9641%-137 - C1 -1MXS - ALKD_PSEPU -
8 PsiBlast_PDB 92.6344%-140 - C1 -4BK9 - ? -
35 PsiBlast_CBE 91.9438%-138 - C1 -4E38 - ? -
33 PsiBlast_CBE 91.8344%-140 - C1 -4BK9 - ? -
12 PsiBlast_PDB 91.7738%-133 - C1 -4E38 - ? -
34 PsiBlast_CBE 91.2244%-140 - C1 -4BK9 - ? -
25 PsiBlast_CBE 90.1051%-135 - C1 -1EUA 2.9 ALKH_ECOLI
36 PsiBlast_CBE 89.5038%-136 - C1 -4E38 - ? -
10 PsiBlast_PDB 88.8045%-133 - C1 -3VCR 2.6 ?
2 PsiBlast_PDB 88.6451%-131 - C1 -1EUA 2.9 ALKH_ECOLI
24 PsiBlast_CBE 88.3051%-129 - C1 -1EUN - ALKH_ECOLI -
3 PsiBlast_PDB 88.1651%-133 - C1 -1EUN - ALKH_ECOLI -
1 PsiBlast_PDB 88.0351%-130 - C1 -1FQ0 - ALKH_ECOLI -
6 PsiBlast_PDB 88.0251%-132 - C1 -1WAU - ALKH_ECOLI -
22 PsiBlast_CBE 87.8851%-133 - C1 -1FQ0 3.4 ALKH_ECOLI
21 PsiBlast_CBE 87.8251%-131 - C1 -1FQ0 3.2 ALKH_ECOLI
32 PsiBlast_CBE 87.7450%-130 - C1 -1FWR 2.2 ALKH_ECOLI
26 PsiBlast_CBE 87.5951%-129 - C1 -1EUA 3.3 ALKH_ECOLI
7 PsiBlast_PDB 86.9350%-130 - C1 -1FWR 2.7 ALKH_ECOLI
31 PsiBlast_CBE 86.4350%-131 - C1 -1FWR 3.1 ALKH_ECOLI