@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0942: (2016-03-20 )
MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRARKKIDSTLEGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDGESSNDFIGRFGIGLLSCFIVSDEIVMISTSQKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEEINSWTKQFSDKETLSTLSREQIIQYGEYILGTHFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKNTVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIAKNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A94_B_4(2QG0)
HS90A_HUMAN
[Raw transfer]




A56_A_5(2QF6)
HS90A_HUMAN
[Raw transfer]




A56_D_8(2QF6)
HS90A_HUMAN
[Raw transfer]




B2L_A_3(3B26)
HS90A_HUMAN
[Raw transfer]




A94_A_3(2QG0)
HS90A_HUMAN
[Raw transfer]




819_B_4(3HHU)
HS90A_HUMAN
[Raw transfer]




A56_C_7(2QF6)
HS90A_HUMAN
[Raw transfer]




3JC_A_2(4W7T)
HS90A_HUMAN
[Raw transfer]




ZZ6_A_2(2WI6)
HS90A_HUMAN
[Raw transfer]




TUH_B_4(3TUH)
HS90A_HUMAN
[Raw transfer]




42C_A_3(4FCP)
HS90A_HUMAN
[Raw transfer]




ADP_A_3(2IOR)
HTPG_ECOLI
[Raw transfer]




819_A_3(3HHU)
HS90A_HUMAN
[Raw transfer]




GOL_A_3(3B28)
HS90A_HUMAN
[Raw transfer]




LGA_A_4(2XDU)
HS90A_HUMAN
[Raw transfer]




LGA_A_3(2JJC)
HS90A_HUMAN
[Raw transfer]




B2J_B_5(3B24)
HS90A_HUMAN
[Raw transfer]




A13_A_3(2QFO)
HS90A_HUMAN
[Raw transfer]




A51_A_4(2QFO)
HS90A_HUMAN
[Raw transfer]




1 PsiBlast_PDB 90.6623% -97 - C6 -2IOQ - HTPG_ECOLI -
113 HHSearch 83.0921% -89 - C4 -2IOQ - HTPG_ECOLI -
111 HHSearch 82.1220% -72 - C4 -2CG9 - HSP82_YEAST -
112 HHSearch 79.4620% -78 * C4 *2O1U - ? -
2 PsiBlast_PDB 76.8823% -83 - C6 -1Y4S - HTPG_ECOLI -
3 PsiBlast_PDB 73.0523% -84 - C6 -1Y4U - HTPG_ECOLI -
101 Fugue 73.0118% -73 - C4 -2O1U - ? -
117 HHSearch 69.0720% -77 - C4 -1Y4S - HTPG_ECOLI -
4 PsiBlast_PDB 57.9525% -59 - C6 -4J0B - ? -
5 PsiBlast_PDB 56.7424% -67 - C6 -4Z1I - TRAP1_HUMAN -
31 PsiBlast_CBE 56.4732% -63 - C6 -3R4N - HS90A_HUMAN -
115 HHSearch 55.9616% -91 - C4 -3HJC - ? -
24 PsiBlast_CBE 55.9632% -62 - C6 -3RLQ - HS90A_HUMAN -
43 PsiBlast_CBE 55.6832% -60 - C6 -3EKO - HS90A_HUMAN -
52 PsiBlast_CBE 55.6132% -54 - C6 -2QG0 5.0 HS90A_HUMAN
27 PsiBlast_CBE 55.4832% -61 - C6 -3R4P - HS90A_HUMAN -
83 PsiBlast_CBE 55.3632% -61 - C6 -3VHD - HS90A_HUMAN -
37 PsiBlast_CBE 55.3232% -59 - C6 -3K98 - HS90A_HUMAN -
58 PsiBlast_CBE 54.9832% -57 - C6 -3TUH - HS90A_HUMAN -
81 PsiBlast_CBE 54.8332% -54 - C6 -3WHA - HS90A_HUMAN -
51 PsiBlast_CBE 54.7632% -54 - C6 -2QG0 5.0 HS90A_HUMAN
57 PsiBlast_CBE 54.6632% -54 - C6 -3TUH 5.4 HS90A_HUMAN
100 PsiBlast_CBE 54.0732% -56 - C6 -2WI6 4.9 HS90A_HUMAN
91 PsiBlast_CBE 53.9932% -52 - C6 -3B24 3.3 HS90A_HUMAN
53 PsiBlast_CBE 53.9332% -54 - C6 -2QFO 3.7 HS90A_HUMAN
21 PsiBlast_CBE 53.8432% -51 - C6 -3HHU 6.3 HS90A_HUMAN
89 PsiBlast_CBE 53.7732% -52 - C6 -3B26 4.7 HS90A_HUMAN
93 PsiBlast_CBE 53.3332% -52 - C6 -4W7T 4.6 HS90A_HUMAN
87 PsiBlast_CBE 52.9232% -55 - C6 -3B28 3.1 HS90A_HUMAN
18 PsiBlast_PDB 52.1932% -51 - C6 -3HHU 5.4 HS90A_HUMAN
63 PsiBlast_CBE 52.0832% -51 - C6 -2QF6 4.1 HS90A_HUMAN
64 PsiBlast_CBE 51.5932% -51 - C6 -2QF6 5.3 HS90A_HUMAN
66 PsiBlast_CBE 51.1532% -51 - C6 -2QF6 4.4 HS90A_HUMAN
70 PsiBlast_CBE 50.8932% -53 - C6 -2JJC 3.0 HS90A_HUMAN
98 PsiBlast_CBE 50.7532% -51 - C6 -4FCP 3.2 HS90A_HUMAN
54 PsiBlast_CBE 50.0632% -47 - C6 -2XDU 3.1 HS90A_HUMAN
6 PsiBlast_PDB 47.7133% -55 - C6 -2IOR 5.2 HTPG_ECOLI