@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2460: (2016-04-03 )
MSDLINIQKKLLPDVLMIMQKRYQILRSIYFSEPVGRRTLAGMLGMSERVLRGEVEFLKAQGLVEIASSGMTVTKEGLVVFRDLESVMNQLSGLHSMEEQLAKKLQIKKCLVVQGDSDDTPWVREEMGRVAVEQLDMALTEKRNIVAVMGGSTMATVAEMMTTDFAKGRELLFVPGRGGIGEDLDNQANTICDKMATKTNTKHRVLYVPEQLGEEAYRSLLKEPAIQEGLRLVQSANAIILGIGDALAMAKRRHTGEDVLEKIIHRKAVGEAFGYYFDEQGEVVHKVPTFGLQFEDLAQIPHIIAVAGGTSKAKAIKSYMKSAPKNTILITDEGAAKSLLKGSNTLLK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

F6P_A_3(3BXH)
CGGR_BACSU
[Raw transfer]




FBP_A_3(3BXF)
CGGR_BACSU
[Raw transfer]




F6P_B_4(3BXH)
CGGR_BACSU
[Raw transfer]




BG6_B_4(3BXG)
CGGR_BACSU
[Raw transfer]




BG6_A_3(3BXG)
CGGR_BACSU
[Raw transfer]




13P_B_4(3BXE)
CGGR_BACSU
[Raw transfer]




13P_B_8(3BXF)
CGGR_BACSU
[Raw transfer]




13P_A_3(3BXE)
CGGR_BACSU
[Raw transfer]




GOL_A_3(4GO1)
LSRR_ECOLI
[Raw transfer]




21 PsiBlast_CBE 98.5854%-102 - C4 -3BXH 4.7 CGGR_BACSU
24 PsiBlast_CBE 98.0454%-102 - C4 -3BXE 3.9 CGGR_BACSU
22 PsiBlast_CBE 97.9454%-102 - C4 -3BXG 5.4 CGGR_BACSU
3 PsiBlast_PDB 97.2654%-103 - C4 -3BXF 6.2 CGGR_BACSU
5 PsiBlast_PDB 97.1054%-104 - C4 -3BXH 4.8 CGGR_BACSU
4 PsiBlast_PDB 97.0254%-100 - C4 -3BXG 5.0 CGGR_BACSU
2 PsiBlast_PDB 96.9254%-102 - C4 -3BXE 3.7 CGGR_BACSU
23 PsiBlast_CBE 95.8254% -99 - C4 -3BXF 3.9 CGGR_BACSU
29 HHSearch 95.0554%-104 - C4 -2OKG - CGGR_BACSU -
6 PsiBlast_PDB 94.8252%-104 - C4 -2OKG - CGGR_BACSU -
1 PsiBlast_PDB 91.4248% -96 - C4 -2O0M - ? -
25 HHSearch 91.0848% -95 - C4 -2O0M - ? -
48 Fugue 80.9219% -90 - C4 -2W48 - SORC_KLEPN -
26 HHSearch 78.1719% -88 - C4 -2W48 - SORC_KLEPN -
11 PsiBlast_PDB 72.1125% -78 - C4 -4L4Z - LSRR_ECOLI -
14 PsiBlast_PDB 71.3427% -70 - C4 -3KV1 - ? -
10 PsiBlast_PDB 70.8725% -80 - C4 -4L4Y - LSRR_ECOLI -
28 HHSearch 70.6921% -84 - C4 -3EFB - ? -
27 HHSearch 70.1921% -81 - C4 -2GNP - ? -
13 PsiBlast_PDB 69.6825% -78 - C4 -4L51 - LSRR_ECOLI -