@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0441: (2015-11-30 )
MKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEALKSGIEDILVVTGKSKRSIEDHFDSNFELEYNLKEKGKNELLKLVDETTGIRLHFIRQSHPRGLGDAVLQAKAFVGNEPFVVMLGDDLMDITNNKVIPLTKQLINDFEATHASTIAVMEVPHEDVSAYGVIAPQGEGVNGLYSVNTFVEKPSPEEAPSNLAIIGRYLLTPEIFNILETQKPGAGNEIQLTDAIDTLNKTQRVFARKFTGDRYDVGDKFGFMKTSIDYALQHPQVKDDLKKYIIDLGKSLEKTSKK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UPG_B_9(3JUK)
?
[Raw transfer]



GUD_A_13(2PA4)
?
[Raw transfer]



GUD_B_14(2PA4)
?
[Raw transfer]



GUD_A_13(2PA4)
?
[Raw transfer]



GUD_D_16(2PA4)
?
[Raw transfer]



GUD_C_15(2PA4)
?
[Raw transfer]



UPG_A_5(3JUK)
?
[Raw transfer]



UPG_A_5(3JUK)
?
[Raw transfer]



UPG_D_17(3JUK)
?
[Raw transfer]



UPG_C_13(3JUK)
?
[Raw transfer]
2 PsiBlast_PDB 97.4746%-101 - C1 -3JUK 7.7 ?
22 PsiBlast_CBE 97.1346% -98 - C1 -3JUK 8.1 ?
23 PsiBlast_CBE 96.4246% -99 - C1 -3JUK 7.6 ?
21 PsiBlast_CBE 95.9546% -98 - C1 -3JUK 8.0 ?
42 HHSearch 95.3546% -98 - C1 -3JUK 7.7 ?
1 PsiBlast_PDB 94.5846% -95 - C1 -3JUJ - ? -
28 PsiBlast_CBE 92.9844% -90 - C1 -2UX8 - ? -
27 PsiBlast_CBE 91.9144% -92 - C1 -2UX8 - ? -
29 PsiBlast_CBE 90.9844% -89 - C1 -2UX8 - ? -
3 PsiBlast_PDB 90.6438% -95 - C1 -2PA4 6.9 ?
30 PsiBlast_CBE 90.1944% -89 - C1 -2UX8 - ? -
25 PsiBlast_CBE 89.9244% -91 - C1 -2UX8 - ? -
31 PsiBlast_CBE 89.8738%-100 - C1 -2PA4 6.9 ?
26 PsiBlast_CBE 89.8744% -89 - C1 -2UX8 - ? -
32 PsiBlast_CBE 88.4638% -94 - C1 -2PA4 6.4 ?
24 PsiBlast_CBE 88.4244% -98 - C1 -2UX8 - ? -
40 HHSearch 88.3738% -88 - C1 -2PA4 6.9 ?
33 PsiBlast_CBE 87.8538% -92 - C1 -2PA4 5.9 ?
41 HHSearch 72.0024% -97 - C1 -1LVW - ? -
47 HHSearch 70.5722% -89 - C1 -3BRK - GLGC_RHIRD -