@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0541: (2015-12-01 )
MIVGEQEARALIKPRPKSSHKGDYGSVLLIGGFYPYGGAIIMAALACVKTGAGLVTVATQSCNIPSLHSQLPEVMAFDSDDYKWLEKSIVQSDVIVIGPGLGVSESSRKILNQTMEKIQSHQSVIIDGSALTLLSEGAFPQTKAKNLVLTPHQKEWERLSGIAVSQQTKENTQTALKSFPKGTILVAKSSHTRIFQDLDEKEIIVGGPYQATGGMGDTLCGMIAGMLAQFKEASPLDKVSVGVYLHSAIAQELSKEAYVVLPTTISDEIPKEMARLSK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

APR_A_6(3RS8)
NNR_THEMA
[Raw transfer]




APR_A_6(3RSG)
NNR_THEMA
[Raw transfer]




COA_A_2(3RQ5)
NNRD_BACSU
[Raw transfer]




EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]




EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]




EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]




ADP_A_7(3RRE)
NNR_THEMA
[Raw transfer]




1 PsiBlast_PDB 97.9753%-108 - C3 -3BGK - ? -
43 HHSearch 96.7553%-106 - C3 -3BGK - ? -
44 HHSearch 90.1143%-101 - C3 -2R3B 2.2 NNRD_ENTFA
3 PsiBlast_PDB 89.4543%-117 - C3 -2R3E - NNRD_ENTFA -
2 PsiBlast_PDB 89.2643%-115 - C3 -2R3B 2.2 NNRD_ENTFA
33 Fugue 86.3641% -93 - C3 -2R3B 2.2 NNRD_ENTFA
30 PsiBlast_CBE 82.0331% -80 - C3 -3RQ2 - NNRD_BACSU -
31 PsiBlast_CBE 81.3631% -79 - C3 -3RPZ - NNRD_BACSU -
32 PsiBlast_CBE 81.3431% -79 - C3 -3RPH - NNRD_BACSU -
25 PsiBlast_CBE 81.3431% -80 - C3 -3RQQ - NNRD_BACSU -
24 PsiBlast_CBE 81.1531% -81 - C3 -3RQX - NNRD_BACSU -
27 PsiBlast_CBE 80.8031% -81 - C3 -3RQ8 - NNRD_BACSU -
28 PsiBlast_CBE 80.7731% -79 - C3 -3RQ6 - NNRD_BACSU -
4 PsiBlast_PDB 80.1333% -86 - C3 -3RS8 6.6 NNR_THEMA
26 PsiBlast_CBE 80.0531% -79 - C3 -3RQH - NNRD_BACSU -
29 PsiBlast_CBE 79.9831% -83 - C3 -3RQ5 3.6 NNRD_BACSU
20 PsiBlast_PDB 79.8733% -85 - C3 -3RRJ - NNR_THEMA -
11 PsiBlast_PDB 79.8433% -86 - C3 -3RTA - NNR_THEMA -
6 PsiBlast_PDB 79.8233% -87 - C3 -3RSF - NNR_THEMA -
9 PsiBlast_PDB 79.6533% -84 - C3 -3RT7 - NNR_THEMA -
18 PsiBlast_PDB 79.4533% -86 - C3 -3RRE 6.2 NNR_THEMA
23 PsiBlast_CBE 79.1133% -85 - C3 -3RSG 6.6 NNR_THEMA