@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu17640: (2016-06-28 )
MIKLCREVWIEVNLDAVKKNLRAIRRHIPHKSKIMAVVKANGYGHGSIEVARHALEHGASELAVASVEEGIVLRKAGITAPILVLGFTSLSCVKKSAAWNITLSAFQVDWMKEANEILEKEASANRLAIHINVDTGMGRLGVRTKEELLEVVKALKASKFLRWTGIFTHFSTADEPDTTLTKLQHEKFISFLSFLKKQGIELPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKQLNLVKLEPALSLKARIAYVKTMRTEPRTVSYGATYIAEPNEVIATLPIGYADGYSRALSNRGFVLHRGKRVPVAGRVTMDMIMVSLGENGEGKQGDEVVIYGKQKGAEISVDEVAEMLNTINYEVVSTLSRRIPRFYIRDGEIFKVSTPVLYV

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BME_A_5(3OO2)
ALR1_STAAC
[Raw transfer]




DCS_C_6(3E6E)
?
[Raw transfer]




IN5_B_4(1BD0)
ALR_GEOSE
[Raw transfer]




DCS_A_4(3E6E)
?
[Raw transfer]




IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]




IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]




PLP_C_10(3E5P)
?
[Raw transfer]




DCS_B_5(3E6E)
?
[Raw transfer]




IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]




DCS_A_3(4LUT)
?
[Raw transfer]




PLP_B_7(3E5P)
?
[Raw transfer]




PLP_A_5(1SFT)
ALR_GEOSE
[Raw transfer]




PLP_A_3(4A3Q)
ALR1_STAAM
[Raw transfer]




PLP_A_3(4A3Q)
ALR1_STAAM
[Raw transfer]




PLP_B_11(4A3Q)
ALR1_STAAM
[Raw transfer]




PLP_B_6(1SFT)
ALR_GEOSE
[Raw transfer]




PLP_A_4(3E5P)
?
[Raw transfer]




PLP_B_4(1XFC)
ALR_MYCTU
[Raw transfer]




PLP_A_3(1XFC)
ALR_MYCTU
[Raw transfer]




PLP_A_4(3E5P)
?
[Raw transfer]




GOL_B_18(4DYJ)
ALR_PSEPU
[Raw transfer]




ALA_B_6(4Y2W)
ALR1_CALS4
[Raw transfer]




ALA_B_6(4Y2W)
ALR1_CALS4
[Raw transfer]




ALA_A_4(4Y2W)
ALR1_CALS4
[Raw transfer]




21 PsiBlast_CBE 94.5342%-136 - C2 -1SFT 5.6 ALR_GEOSE
2 PsiBlast_PDB 94.3542%-140 - C2 -1SFT 4.3 ALR_GEOSE
22 PsiBlast_CBE 94.2142%-135 - C2 -1BD0 7.5 ALR_GEOSE
3 PsiBlast_PDB 92.5142%-137 - C2 -1BD0 7.3 ALR_GEOSE
6 PsiBlast_PDB 90.9739%-135 - C2 -3OO2 - ALR1_STAAC -
1 PsiBlast_PDB 90.3943%-116 - C2 -3HA1 - ? -
5 PsiBlast_PDB 87.8539%-144 - C2 -3UW6 - ALR_GEOSE -
23 PsiBlast_CBE 86.9539%-132 - C2 -3OO2 Error ALR1_STAAC
8 PsiBlast_PDB 86.6036% -94 - C2 -4LUY - ? -
7 PsiBlast_PDB 83.8539%-136 - C2 -4A3Q 3.8 ALR1_STAAM
24 PsiBlast_CBE 82.5339%-133 - C2 -4A3Q 3.7 ALR1_STAAM
9 PsiBlast_PDB 81.9636% -94 - C2 -4LUT 5.1 ?
4 PsiBlast_PDB 81.7640%-152 - C2 -4ILS - ALR_GEOSE -
28 PsiBlast_CBE 80.9440% -76 - C2 -3E5P 3.7 ?
27 PsiBlast_CBE 80.2240% -78 - C2 -3E5P 3.2 ?
11 PsiBlast_PDB 79.8640% -76 - C2 -3E5P 4.3 ?
12 PsiBlast_PDB 79.8440% -80 - C2 -3E6E 5.6 ?
10 PsiBlast_PDB 79.2736% -94 - C2 -4LUS - ? -
25 PsiBlast_CBE 78.7140% -76 - C2 -3E6E 5.5 ?
50 HHSearch 77.6543% -31 - C2 -1BD0 - ALR_GEOSE -
51 HHSearch 77.1335% -53 - C2 -4Y2W 3.3 ALR1_CALS4
26 PsiBlast_CBE 76.0140% -79 - C2 -3E6E 5.3 ?
13 PsiBlast_PDB 72.9136% -33 - C2 -4Y2W 3.3 ALR1_CALS4
61 HHSearch 72.8040% -51 - C2 -4A3Q 3.8 ALR1_STAAM
54 HHSearch 70.3839% -37 * C2 *3E5P 4.3 ?
29 PsiBlast_CBE 69.7736% -35 - C2 -4Y2W 3.2 ALR1_CALS4
14 PsiBlast_PDB 69.5736% -45 - C2 -1XFC 3.6 ALR_MYCTU
30 PsiBlast_CBE 68.2836% -48 - C2 -1XFC 4.5 ALR_MYCTU
36 Fugue 65.4243%-143 - C2 -1BD0 6.8 ALR_GEOSE
37 Fugue 51.9944% -34 - C2 -1BD0 6.8 ALR_GEOSE