@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu22140: (2016-07-04 )
MGYLHDAFSLKGKTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSSLSETQQLVEQEGRIFTSFTLDMSKPEAIKDSAAELFENRQIDILVNNAGIIHREKAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKRGHGKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPIRDDEKRNEDILKRIPAGRWGQADDIGGTAVFLASRASDYVNGHILAVDGGWLSR

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_16(4I08)
FABG_VIBCH
[Raw transfer]



NAP_B_5(4HP8)
?
[Raw transfer]



NAP_A_3(4HP8)
?
[Raw transfer]



NAP_A_3(4HP8)
?
[Raw transfer]



NAD_D_5(4ZA2)
?
[Raw transfer]



NAP_B_4(3UF0)
?
[Raw transfer]



NAP_A_3(3UF0)
?
[Raw transfer]



NAP_A_3(3UF0)
?
[Raw transfer]



GOL_A_7(4G81)
?
[Raw transfer]



GOL_A_14(2EKQ)
?
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]



GCO_A_4(3O03)
?
[Raw transfer]



EDO_B_10(4G81)
?
[Raw transfer]



EDO_A_11(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_D_5(4G81)
?
[Raw transfer]



EDO_D_5(4G81)
?
[Raw transfer]
123 HHSearch 91.8249%-107 - C1 -3UF0 8.2 ?
4 PsiBlast_PDB 91.4649%-107 - C1 -3UF0 8.2 ?
26 PsiBlast_CBE 91.2449%-106 - C1 -3UF0 10.0 ?
114 HHSearch 86.6155% -48 - C1 -4ZA2 - ? -
22 PsiBlast_CBE 86.2154% -35 - C1 -4Z9Y - ? -
25 PsiBlast_CBE 85.9254% -55 - C1 -4HP8 10.3 ?
3 PsiBlast_PDB 85.7654% -55 - C1 -4HP8 8.5 ?
2 PsiBlast_PDB 84.8754% -36 - C1 -4ZA2 - ? -
24 PsiBlast_CBE 84.1254% -37 - C1 -4Z9Y - ? -
23 PsiBlast_CBE 84.1254% -35 - C1 -4Z9Y - ? -
1 PsiBlast_PDB 83.9854% -33 - C1 -4Z9Y - ? -
21 PsiBlast_CBE 83.1254% -37 - C1 -4ZA2 9.8 ?
126 HHSearch 82.5855% -55 - C1 -4HP8 8.5 ?
32 PsiBlast_CBE 74.9541% -25 - C1 -4G81 2.6 ?
30 PsiBlast_CBE 74.7641% -24 - C1 -4G81 - ? -
121 HHSearch 74.6043% -16 - C1 -4J2H - ? -
10 PsiBlast_PDB 74.5142% -41 - C1 -4J2H - ? -
31 PsiBlast_CBE 74.4141% -24 - C1 -4G81 2.3 ?
115 HHSearch 74.2741% -23 - C1 -4G81 2.2 ?
11 PsiBlast_PDB 73.6541% -23 - C1 -4G81 2.2 ?
88 PsiBlast_CBE 70.1734% -63 - C1 -2EKQ 2.6 ?
6 PsiBlast_PDB 69.4942% -33 - C1 -3O03 2.4 ?
58 PsiBlast_CBE 69.0138% -42 - C1 -4I08 8.8 FABG_VIBCH
62 PsiBlast_CBE 67.8938% -41 - C1 -3RRO 2.6 FABG_VIBCH
63 PsiBlast_CBE 67.4138% -41 - C1 -3RRO 3.0 FABG_VIBCH