@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu31750: (2016-07-22 )
MLEYGFKDDSLSLHTDLYQINMAETYWRDGIHEKKAIFELFFRRLPFENGYAVFAGLEKAIEYLENFKFTDSDLSYLQDELGYHEDFIEYLRGLSFTGSLYSMKEGELVFNNEPIMRVEAPLVEAQLIETALLNIVNYQTLIATKAARIKGVIGDEVALEFGTRRAHEMDAAMWGARAALIGGFSATSNVRAGKRFNIPVSGTHAHALVQAYRDEYTAFKKYAETHKDCVFLVDTYDTLRSGMPNAIRVAKEFGDRINFIGIRLDSGDLAYLSKKARKMLDEAGFTDAKVIASSDLDEHTIMNLKAQGARIDVWGVGTKLITAYDQPALGAVYKLVAIEEDGKMVDTIKISSNPEKVTTPGRKKVYRIINQSNHHSEGDYIALYDEQVNDQKRLRMFHPVHTFISKFVTNFYAKDLHELIFEKGILCYQNPEISDIQQYVQDNLSLLWEEYKRISKPEEYPVDLSEDCWSNKMQRIHEVKSRIEEELEEE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NCN_G_7(1YTK)
PNCB_THEAC
[Raw transfer]



DPO_A_12(2F7F)
?
[Raw transfer]



DPO_A_12(2F7F)
?
[Raw transfer]



TRS_A_10(2I1O)
PNCB_THEAC
[Raw transfer]



FMT_A_21(4MZY)
?
[Raw transfer]



PCP_G_7(1YTE)
PNCB_THEAC
[Raw transfer]



MLA_A_16(4MZY)
?
[Raw transfer]



MPD_A_11(2I1O)
PNCB_THEAC
[Raw transfer]



MLA_A_16(4MZY)
?
[Raw transfer]



ACY_A_13(2I1O)
PNCB_THEAC
[Raw transfer]
2 PsiBlast_PDB 93.1760% -66 - C6 -4MZY 3.0 ?
19 HHSearch 93.0759% -73 - C6 -4MZY 2.5 ?
39 Fugue 92.4461% -62 - C6 -2F7F 3.3 ?
1 PsiBlast_PDB 92.2060% -62 - C6 -2F7F 3.3 ?
20 HHSearch 68.0734% -23 * C6 *4YUB - PNCB_HUMAN -
3 PsiBlast_PDB 66.3232% -16 - C6 -4YUB - PNCB_HUMAN -
22 HHSearch 57.2126% -36 - C6 -2I14 - ? -
25 HHSearch 53.5423% -37 - C6 -1YIR - PNCB2_PSEAE -
8 PsiBlast_PDB 52.0926% -37 - C6 -2I14 - ? -
26 HHSearch 51.6926% 8 - C6 -2I1O - PNCB_THEAC -
28 HHSearch 49.4722% -5 - C6 -3OS4 - PNCB_YERPE -
21 HHSearch 47.5121% 25 - C6 -4LVF - NAMPT_HUMAN -
42 Fugue 45.9620% 27 - C6 -2H3B - NAMPT_MOUSE -
33 HHSearch 45.9419% -54 - C6 -2B7N - NADC_HELPY -
29 HHSearch 45.8522% 12 - C6 -1VLP - NPT1_YEAST -
24 HHSearch 45.2822% -11 - C6 -4HL7 - PNCB_VIBCH -
7 PsiBlast_PDB 45.1630% 29 - C6 -2I1O 2.3 PNCB_THEAC
43 Fugue 45.0720% 29 - C6 -2E5D - NAMPT_HUMAN -
6 PsiBlast_PDB 44.6130% 31 - C6 -1YTK 5.2 PNCB_THEAC
5 PsiBlast_PDB 43.7430% 32 - C6 -1YTE 3.3 PNCB_THEAC