@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1393c: (2016-05-01 )
MMPDYHALIVGAGFSGIGAAIKLDRAGFSDYLVVEAGDGVGGTWHWNTYPGIAVDIPSFSYQFSFEQSRHWSRTYAPGHELKAYAEHCVDKYGIRSRIRLNTKVLAAEFDDEHSLWRVQTDPGGEITARFLISACGILTVPKLPDIDGVDSFEGVTMHTARWDHTQDLTGKRVGIIGTGASAVQVIPEMAPIVSHLTVFQRTPIWCFPKFDVPLPTAVRWAMRIPGGKAVHRLLSQAFVEATFPIAAHYFAVFPLAKHMESAGRRYLRQQVHDPVVREQLTPRYAVGCKRPGFHNTYLSTFNRDNVRLVTEPIDKITPTAVATTDGASHEIDVLVLATGFKVLDTDSIPTYAVTGTGGASLSRFWDEHRLQAYEGVSVPGYPNFFTVFGPYGYVGSSYFALIETQAHHIIRCLKRARRTGATRIEVTEEANARYFAEVMRRRHRQVFWQDSCRLANSYYFDKNGDVPLRPTTTVEAYWRSRRFDLGDYRISS

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_3(4D04)
PAMO_THEFY
[Raw transfer]



NAP_A_4(3UP4)
OTEMO_PSEPU
[Raw transfer]



NAP_A_3(4D03)
PAMO_THEFY
[Raw transfer]



N01_A_3(4OVI)
PAMO_THEFY
[Raw transfer]



NAP_A_3(2YLR)
PAMO_THEFY
[Raw transfer]



NAP_A_4(3UP5)
OTEMO_PSEPU
[Raw transfer]



NAP_A_3(2YLT)
PAMO_THEFY
[Raw transfer]



NAP_A_3(2YM2)
PAMO_THEFY
[Raw transfer]



N01_A_3(4C77)
PAMO_THEFY
[Raw transfer]



NAP_B_6(3UP4)
OTEMO_PSEPU
[Raw transfer]



NAP_A_3(2YLW)
PAMO_THEFY
[Raw transfer]



NAP_A_3(2YLS)
PAMO_THEFY
[Raw transfer]



N01_A_3(4C74)
PAMO_THEFY
[Raw transfer]



NAP_A_3(2YM1)
PAMO_THEFY
[Raw transfer]



NAP_A_4(3UOY)
OTEMO_PSEPU
[Raw transfer]



NAP_A_3(2YLX)
PAMO_THEFY
[Raw transfer]



NAP_A_4(3UOZ)
OTEMO_PSEPU
[Raw transfer]



NAP_B_6(3UP5)
OTEMO_PSEPU
[Raw transfer]



NAP_B_6(3UOZ)
OTEMO_PSEPU
[Raw transfer]



NAP_A_3(4RG4)
?
[Raw transfer]



NAP_A_3(3GWD)
?
[Raw transfer]



BCN_A_5(4RG3)
?
[Raw transfer]



BCN_A_5(4RG3)
?
[Raw transfer]
11 PsiBlast_PDB 95.1035%-117 - C2 -2YLR 8.4 PAMO_THEFY
25 PsiBlast_CBE 94.8835%-117 - C2 -3UOV - OTEMO_PSEPU -
17 PsiBlast_PDB 94.7935%-115 - C2 -4D04 9.6 PAMO_THEFY
113 HHSearch 94.5236%-104 - C2 -4AP3 - ? -
1 PsiBlast_PDB 94.4935%-114 - C2 -3UOV - OTEMO_PSEPU -
3 PsiBlast_PDB 94.4635%-117 - C2 -3UOY 8.4 OTEMO_PSEPU
15 PsiBlast_PDB 94.2135%-116 - C2 -4OVI 9.2 PAMO_THEFY
12 PsiBlast_PDB 94.2035%-117 - C2 -2YLS 9.3 PAMO_THEFY
24 PsiBlast_CBE 93.9635%-116 - C2 -3UOX - OTEMO_PSEPU -
18 PsiBlast_PDB 93.8535%-116 - C2 -2YLW 7.9 PAMO_THEFY
13 PsiBlast_PDB 93.7735%-116 - C2 -2YLT 9.5 PAMO_THEFY
16 PsiBlast_PDB 93.7135%-117 - C2 -4D03 9.1 PAMO_THEFY
14 PsiBlast_PDB 93.6135%-117 - C2 -4C74 9.3 PAMO_THEFY
10 PsiBlast_PDB 93.5535%-117 - C2 -1W4X - PAMO_THEFY -
4 PsiBlast_PDB 93.5335%-115 - C2 -3UOZ 8.2 OTEMO_PSEPU
2 PsiBlast_PDB 93.5335%-114 - C2 -3UOX - OTEMO_PSEPU -
27 PsiBlast_CBE 93.0835%-118 - C2 -2YLZ - PAMO_THEFY -
6 PsiBlast_PDB 92.9135%-115 - C2 -3UP5 7.1 OTEMO_PSEPU
19 PsiBlast_PDB 92.9035%-114 - C2 -2YM1 8.4 PAMO_THEFY
28 PsiBlast_CBE 92.8835%-115 - C2 -2YLX 9.4 PAMO_THEFY
22 PsiBlast_CBE 92.8635%-115 - C2 -3UP4 7.9 OTEMO_PSEPU
26 PsiBlast_CBE 92.7035%-117 - C2 -4C77 8.0 PAMO_THEFY
21 PsiBlast_CBE 92.6435%-114 - C2 -3UP5 7.7 OTEMO_PSEPU
20 PsiBlast_PDB 92.3735%-113 - C2 -2YM2 8.0 PAMO_THEFY
23 PsiBlast_CBE 91.8835%-113 - C2 -3UOZ 8.3 OTEMO_PSEPU
5 PsiBlast_PDB 91.7035%-114 - C2 -3UP4 8.0 OTEMO_PSEPU
9 PsiBlast_PDB 89.4533%-105 - C2 -4RG4 6.8 ?
7 PsiBlast_PDB 89.1333%-100 - C2 -3GWD 8.9 ?
112 HHSearch 88.5933% -96 * C2 *4RG3 1.5 ?
8 PsiBlast_PDB 88.5933%-102 - C2 -4RG3 1.5 ?