@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2539c: (2016-05-11 )
MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_B_2(1ZYU)
AROK_MYCTU
[Raw transfer]




ANP_A_2(3BAF)
AROK_MYCTU
[Raw transfer]




ADP_D_15(2DFT)
AROK_MYCTU
[Raw transfer]




ADP_A_5(1U8A)
AROK_MYCTU
[Raw transfer]




ADP_A_3(2IYQ)
AROK_MYCTU
[Raw transfer]




ADP_A_4(4BQS)
AROK_MYCTU
[Raw transfer]




ADP_A_2(2IYV)
AROK_MYCTU
[Raw transfer]




ADP_A_3(2DFN)
AROK_MYCTU
[Raw transfer]




ADP_A_3(2IYZ)
AROK_MYCTU
[Raw transfer]




ADP_C_8(4BQS)
AROK_MYCTU
[Raw transfer]




ADP_A_2(2IYV)
AROK_MYCTU
[Raw transfer]




ATP_A_2(2IYW)
AROK_MYCTU
[Raw transfer]




ADP_B_13(2DFT)
AROK_MYCTU
[Raw transfer]




ADP_A_8(1L4Y)
AROK_MYCTU
[Raw transfer]




ADP_B_6(4BQS)
AROK_MYCTU
[Raw transfer]




ADP_A_2(2IYU)
AROK_MYCTU
[Raw transfer]




ADP_A_10(1L4U)
AROK_MYCTU
[Raw transfer]




ADP_A_5(1WE2)
AROK_MYCTU
[Raw transfer]




S3P_A_2(2IYY)
AROK_MYCTU
[Raw transfer]




ADP_B_7(2SHK)
AROL_DICCH
[Raw transfer]




SKM_B_4(2IYR)
AROK_MYCTU
[Raw transfer]




SKM_A_2(2IYX)
AROK_MYCTU
[Raw transfer]




SKM_A_7(2G1K)
AROK_MYCTU
[Raw transfer]




OSA_A_4(3N2E)
AROK_HELPY
[Raw transfer]




SKM_A_2(4Y0A)
?
[Raw transfer]




SKM_A_2(4Y0A)
?
[Raw transfer]




SKM_A_3(2IYR)
AROK_MYCTU
[Raw transfer]




SKM_A_2(2IYS)
AROK_MYCTU
[Raw transfer]




SKM_C_3(1ZUI)
AROK_HELPY
[Raw transfer]




ADP_A_2(3MUF)
AROK_HELPY
[Raw transfer]




OSA_B_7(3N2E)
AROK_HELPY
[Raw transfer]




BME_A_4(3VAA)
AROK_BACTN
[Raw transfer]




ADP_B_13(2DFT)
AROK_MYCTU
[Raw transfer]




ADP_D_15(2DFT)
AROK_MYCTU
[Raw transfer]




10 PsiBlast_PDB 95.75100%-125 - C2 -3BAF 7.0 AROK_MYCTU
18 PsiBlast_PDB 93.44100%-111 - C2 -2IYW 8.0 AROK_MYCTU
17 PsiBlast_PDB 93.40100%-108 - C2 -2IYV 7.5 AROK_MYCTU
113 HHSearch 93.17100%-109 - C2 -2IYV 7.5 AROK_MYCTU
15 PsiBlast_PDB 93.13100%-112 - C2 -2IYT - AROK_MYCTU -
14 PsiBlast_PDB 92.94100%-112 - C2 -2IYS 2.4 AROK_MYCTU
2 PsiBlast_PDB 92.51100%-116 - C2 -1L4Y 8.0 AROK_MYCTU
5 PsiBlast_PDB 92.38100%-111 - C2 -1ZYU 5.7 AROK_MYCTU
3 PsiBlast_PDB 92.23100%-116 - C2 -1U8A 7.6 AROK_MYCTU
1 PsiBlast_PDB 92.08100%-113 - C2 -1L4U 8.3 AROK_MYCTU
11 PsiBlast_PDB 91.32100%-114 - C2 -4BQS 6.7 AROK_MYCTU
20 PsiBlast_PDB 91.31100%-116 - C2 -2IYY 4.2 AROK_MYCTU
7 PsiBlast_PDB 91.27100%-113 - C2 -2G1K 3.6 AROK_MYCTU
19 PsiBlast_PDB 91.19100%-112 - C2 -2IYX 3.6 AROK_MYCTU
22 PsiBlast_CBE 90.69100%-111 - C2 -4BQS 7.0 AROK_MYCTU
21 PsiBlast_CBE 90.61100%-113 - C2 -4BQS 7.3 AROK_MYCTU
8 PsiBlast_PDB 90.42100%-111 - C2 -2DFN 7.1 AROK_MYCTU
12 PsiBlast_PDB 90.35100%-112 - C2 -2IYQ 7.8 AROK_MYCTU
27 PsiBlast_CBE 90.29100%-116 - C2 -2IYZ 6.6 AROK_MYCTU
16 PsiBlast_PDB 89.43100%-115 - C2 -2IYU 7.1 AROK_MYCTU
28 PsiBlast_CBE 89.42100%-111 - C2 -2IYR 3.8 AROK_MYCTU
4 PsiBlast_PDB 88.92100%-106 - C2 -1WE2 7.6 AROK_MYCTU
9 PsiBlast_PDB 88.22100%-122 - C2 -2DFT 3.0 AROK_MYCTU
24 PsiBlast_CBE 88.01100%-110 - C2 -2DFT 6.5 AROK_MYCTU
26 PsiBlast_CBE 87.68100%-104 - C2 -2DFT 7.3 AROK_MYCTU
13 PsiBlast_PDB 87.41100%-109 - C2 -2IYR 2.9 AROK_MYCTU
25 PsiBlast_CBE 86.18100%-111 - C2 -2DFT 3.0 AROK_MYCTU
116 HHSearch 67.8137% -88 * C2 *4Y0A 4.2 ?
32 PsiBlast_CBE 66.2835%-102 - C2 -2SHK 5.2 AROL_DICCH
29 PsiBlast_CBE 60.3240% -79 - C2 -4Y0A 4.2 ?
39 PsiBlast_CBE 57.4332% -92 - C2 -3N2E 4.9 AROK_HELPY
38 PsiBlast_CBE 56.9032% -86 - C2 -3N2E 6.1 AROK_HELPY
40 PsiBlast_CBE 56.0032% -90 - C2 -3MUF 5.3 AROK_HELPY
43 PsiBlast_CBE 55.5032% -87 - C2 -1ZUI 5.2 AROK_HELPY