@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3025c: (2016-05-16 )
MAYLDHAATTPMHPAAIEAMAAVQRTIGNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRRDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDANGIECSTGSACTAGVAQPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALAAAGASR

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_A_5(4R5F)
ISCS2_ARCFU
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_C_3(1ECX)
?
[Raw transfer]



PLP_C_3(1ECX)
?
[Raw transfer]



PLP_D_4(1ECX)
?
[Raw transfer]



PLP_B_6(3LVJ)
ISCS_ECO57
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_A_5(3LVJ)
ISCS_ECO57
[Raw transfer]



PLP_B_4(3VAX)
?
[Raw transfer]



GOL_A_5(4LW2)
CSDA_ECOLI
[Raw transfer]



PLP_A_3(3A9X)
SCLY_RAT
[Raw transfer]



CYS_F_6(1ECX)
?
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_B_4(3A9X)
SCLY_RAT
[Raw transfer]



PLP_B_7(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_A_3(3LVK)
ISCS_ECO57
[Raw transfer]



PLP_A_3(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_A_3(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_B_8(3A9Y)
SCLY_RAT
[Raw transfer]



LPG_C_3(1I29)
SUFS_ECOLI
[Raw transfer]



CYS_E_5(1ECX)
?
[Raw transfer]



ACY_E_5(1C0N)
SUFS_ECOLI
[Raw transfer]
1 PsiBlast_PDB 98.8599%-102 - C2 -4ISY - ISCSL_MYCTU -
46 HHSearch 98.69100%-101 - C2 -4ISY - ISCSL_MYCTU -
34 Fugue 98.3799%-101 - C2 -4ISY - ISCSL_MYCTU -
21 PsiBlast_CBE 97.5299%-101 - C2 -4ISY - ISCSL_MYCTU -
22 PsiBlast_CBE 97.3599%-101 - C2 -4ISY - ISCSL_MYCTU -
23 PsiBlast_CBE 95.7699%-100 - C2 -4ISY - ISCSL_MYCTU -
7 PsiBlast_PDB 80.1139% -92 - C2 -4HVK - ISCS2_ARCFU -
4 PsiBlast_PDB 79.8839% -91 - C2 -4R5F 4.0 ISCS2_ARCFU
47 HHSearch 79.6339% -92 * C2 *4HVK - ISCS2_ARCFU -
26 PsiBlast_CBE 79.4639% -90 - C2 -4EB5 - ISCS2_ARCFU -
6 PsiBlast_PDB 79.2239% -87 - C2 -4EB7 - ISCS2_ARCFU -
5 PsiBlast_PDB 79.0239% -88 - C2 -4EB5 - ISCS2_ARCFU -
25 PsiBlast_CBE 78.8139% -89 - C2 -4EB7 - ISCS2_ARCFU -
24 PsiBlast_CBE 78.4040% -89 - C2 -3LVJ 3.7 ISCS_ECO57
35 Fugue 77.3836% -95 - C2 -1ECX 3.3 ?
27 PsiBlast_CBE 76.8536% -88 - C2 -1ECX 3.9 ?
2 PsiBlast_PDB 76.4540% -88 - C2 -3LVJ 3.9 ISCS_ECO57
45 HHSearch 76.4137% -95 - C2 -1EG5 3.9 ?
8 PsiBlast_PDB 76.3736% -87 - C2 -1ECX 3.9 ?
9 PsiBlast_PDB 76.2636% -89 - C2 -1EG5 3.9 ?
3 PsiBlast_PDB 75.7740% -87 - C2 -3LVK 3.2 ISCS_ECO57
14 PsiBlast_PDB 73.2832% -84 - C2 -3A9Z 3.9 SCLY_RAT
30 PsiBlast_CBE 73.0832% -85 - C2 -3A9Z 3.9 SCLY_RAT
31 PsiBlast_CBE 72.8032% -85 - C2 -3A9Y 3.3 SCLY_RAT
32 PsiBlast_CBE 72.2832% -83 - C2 -3A9X 3.9 SCLY_RAT
54 HHSearch 72.2334% -80 - C2 -3A9Z 3.9 SCLY_RAT
13 PsiBlast_PDB 71.0532% -81 - C2 -3A9X 4.4 SCLY_RAT
51 HHSearch 70.3136% -88 - C2 -3VAX 3.5 ?
15 PsiBlast_PDB 69.9936% -90 - C2 -3VAX 3.5 ?
33 PsiBlast_CBE 68.1636% -90 - C2 -3VAX 3.7 ?