@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3028c: (2016-05-16 )
MAEVLVLVEHAEGALKKVSAELITAARALGEPAAVVVGVPGTAAPLVDGLKAAGAAKIYVAESDLVDKYLITPAVDVLAGLAESSAPAGVLIAATADGKEIAGRLAARIGSGLLVDVVDVREGGVGVHSIFGGAFTVEAQANGDTPVITVRAGAVEAEPAAGAGEQVSVEVPAAAENAARITAREPAVAGDRPELTEATIVVAGGRGVGSAENFSVVEALADSLGAAVGASRAAVDSGYYPGQFQVGQTGKTVSPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADYGVVGDLFKVAPQLTEAIKARKG

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_C_3(1EFV)
ETFA_HUMAN
[Raw transfer]




FAD_A_3(2A1U)
ETFA_HUMAN
[Raw transfer]




FAD_C_3(1EFV)
ETFA_HUMAN
[Raw transfer]




FAD_C_7(1EFP)
ETFA_PARDE
[Raw transfer]




FAD_D_4(3CLS)
ETFA_METME
[Raw transfer]




FAD_A_5(1EFP)
ETFA_PARDE
[Raw transfer]




FAD_A_5(1EFP)
ETFA_PARDE
[Raw transfer]




FAD_D_5(3CLR)
ETFA_METME
[Raw transfer]




FAD_D_4(3CLT)
ETFA_METME
[Raw transfer]




FAD_A_5(1EFP)
ETFA_PARDE
[Raw transfer]




FAD_D_4(1O97)
ETFA_METME
[Raw transfer]




FAD_D_4(1O97)
ETFA_METME
[Raw transfer]




FAD_D_4(3CLU)
ETFA_METME
[Raw transfer]




FAD_A_3(4KPU)
?
[Raw transfer]




FAD_A_3(4L2I)
?
[Raw transfer]




FAD_A_3(4L2I)
?
[Raw transfer]




FMT_A_8(3IH5)
?
[Raw transfer]




6 PsiBlast_PDB 93.5937%-113 - C6 -4KPU 12.1 ?
26 HHSearch 92.7342%-104 * C6 *1EFV 12.8 ETFA_HUMAN
4 PsiBlast_PDB 92.6942%-105 - C6 -2A1U 12.1 ETFA_HUMAN
25 HHSearch 92.5837%-114 - C6 -4L2I 12.1 ?
7 PsiBlast_PDB 92.5137%-111 - C6 -4L2I 12.1 ?
1 PsiBlast_PDB 92.4142%-103 - C6 -1EFV 12.8 ETFA_HUMAN
3 PsiBlast_PDB 88.7942%-112 - C6 -2A1T - ETFA_HUMAN -
28 HHSearch 88.0446%-103 - C6 -1EFP 12.3 ETFA_PARDE
47 Fugue 86.7445%-102 - C6 -1EFP 12.3 ETFA_PARDE
8 PsiBlast_PDB 84.6934%-105 - C6 -3CLU 11.8 ETFA_METME
15 PsiBlast_PDB 84.2634%-106 - C6 -3CLR 12.0 ETFA_METME
14 PsiBlast_PDB 84.1434%-107 - C6 -3CLS 11.9 ETFA_METME
13 PsiBlast_PDB 83.8534%-106 - C6 -3CLT 12.2 ETFA_METME
22 PsiBlast_CBE 82.8634%-108 - C6 -1O96 - ETFA_METME -
23 PsiBlast_CBE 82.7534%-105 - C6 -1O96 - ETFA_METME -
11 PsiBlast_PDB 82.5634%-108 - C6 -1O96 - ETFA_METME -
24 PsiBlast_CBE 81.5934%-108 - C6 -1O96 - ETFA_METME -
12 PsiBlast_PDB 81.3234%-105 - C6 -1O97 12.5 ETFA_METME
27 HHSearch 81.0932%-104 - C6 -1O97 12.5 ETFA_METME
21 PsiBlast_CBE 77.1948%-101 - C6 -1EFP 12.2 ETFA_PARDE
5 PsiBlast_PDB 75.9748%-100 - C6 -1EFP 12.4 ETFA_PARDE