@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3809c: (2016-05-23 )
MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFTDYRHRVFAMHNGQAYQFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEIDTADAQNLEEKAISLIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQLRPGSPAAPVVYTGPLDRYFDYAEGRLGWRTLDFEVEVLPIGDFQGTAVMNYNDLDVPYTRIHEFRHFHPERDYPTDKTVIMREYSRFAEDDDEPYYPINTEADRALLATYRARAKSETASSKVLFGGRLGTYQYLDMHMAIASALNMYDNVLAPHLRDGVPLLQDGA

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_4(4RPG)
GLF_MYCTU
[Raw transfer]




FAD_B_4(4RPH)
GLF_MYCTU
[Raw transfer]




FAD_C_8(4RPK)
GLF_MYCTU
[Raw transfer]




FAD_A_6(4RPH)
GLF_MYCTU
[Raw transfer]




FDA_A_5(4XGK)
?
[Raw transfer]




FDA_B_12(4XGK)
?
[Raw transfer]




FAD_C_8(4RPJ)
GLF_MYCTU
[Raw transfer]




FAD_C_8(4RPL)
GLF_MYCTU
[Raw transfer]




FAD_C_8(4RPH)
GLF_MYCTU
[Raw transfer]




FAD_A_4(4RPJ)
GLF_MYCTU
[Raw transfer]




FDA_B_4(4MO2)
?
[Raw transfer]




FAD_C_3(1I8T)
GLF_ECOLI
[Raw transfer]




FDA_B_4(4MO2)
?
[Raw transfer]




FAD_A_6(4RPG)
GLF_MYCTU
[Raw transfer]




FAD_B_4(4RPK)
GLF_MYCTU
[Raw transfer]




FAD_A_6(4RPL)
GLF_MYCTU
[Raw transfer]




FAD_C_8(4RPG)
GLF_MYCTU
[Raw transfer]




FAD_C_3(1I8T)
GLF_ECOLI
[Raw transfer]




FAD_C_3(1I8T)
GLF_ECOLI
[Raw transfer]




FAD_A_6(4RPK)
GLF_MYCTU
[Raw transfer]




FDA_B_5(3INT)
GLF1_KLEPN
[Raw transfer]




FAD_D_4(1I8T)
GLF_ECOLI
[Raw transfer]




FAD_B_6(4RPJ)
GLF_MYCTU
[Raw transfer]




FAD_A_2(2BI8)
GLF1_KLEPN
[Raw transfer]




FAD_A_10(4MO2)
?
[Raw transfer]




FAD_A_2(2BI7)
GLF1_KLEPN
[Raw transfer]




FAD_B_5(3GF4)
GLF1_KLEPN
[Raw transfer]




FDA_A_3(3INT)
GLF1_KLEPN
[Raw transfer]




FAD_B_4(4RPL)
GLF_MYCTU
[Raw transfer]




FAD_A_3(3INR)
GLF1_KLEPN
[Raw transfer]




FAD_B_5(3KYB)
GLF1_KLEPN
[Raw transfer]




FAD_A_2(2BI7)
GLF1_KLEPN
[Raw transfer]




FAD_A_2(1WAM)
GLF1_KLEPN
[Raw transfer]




FAD_A_3(3KYB)
GLF1_KLEPN
[Raw transfer]




FAD_A_3(3GF4)
GLF1_KLEPN
[Raw transfer]




40K_A_4(4XGK)
?
[Raw transfer]




40K_B_11(4XGK)
?
[Raw transfer]




22 PsiBlast_CBE 94.90100%-108 - C1 -1V0J - GLF_MYCTU -
23 PsiBlast_CBE 94.78100%-106 - C1 -1V0J - GLF_MYCTU -
24 PsiBlast_CBE 94.7199%-104 - C1 -4RPL 13.0 GLF_MYCTU
1 PsiBlast_PDB 94.62100%-107 - C1 -1V0J - GLF_MYCTU -
4 PsiBlast_PDB 94.5699%-101 - C1 -4RPJ 12.1 GLF_MYCTU
21 PsiBlast_CBE 94.48100%-107 - C1 -1V0J - GLF_MYCTU -
6 PsiBlast_PDB 94.4799%-105 - C1 -4RPL 11.8 GLF_MYCTU
29 PsiBlast_CBE 94.1099%-103 - C1 -4RPJ 11.6 GLF_MYCTU
28 PsiBlast_CBE 94.0499%-103 - C1 -4RPJ 11.9 GLF_MYCTU
2 PsiBlast_PDB 93.9599%-101 - C1 -4RPG 12.1 GLF_MYCTU
3 PsiBlast_PDB 93.9499%-102 - C1 -4RPH 11.5 GLF_MYCTU
32 PsiBlast_CBE 93.8899%-102 - C1 -4RPG 12.2 GLF_MYCTU
30 PsiBlast_CBE 93.8699%-105 - C1 -4RPH 12.4 GLF_MYCTU
31 PsiBlast_CBE 93.7399%-101 - C1 -4RPH 12.1 GLF_MYCTU
116 HHSearch 93.6898%-106 - C1 -1V0J - GLF_MYCTU -
25 PsiBlast_CBE 93.6599%-104 - C1 -4RPL 12.2 GLF_MYCTU
27 PsiBlast_CBE 93.6299%-102 - C1 -4RPK 12.3 GLF_MYCTU
5 PsiBlast_PDB 93.4999%-103 - C1 -4RPK 11.8 GLF_MYCTU
33 PsiBlast_CBE 93.4799% -99 - C1 -4RPG 12.5 GLF_MYCTU
26 PsiBlast_CBE 93.1999%-102 - C1 -4RPK 11.9 GLF_MYCTU
7 PsiBlast_PDB 85.9076%-101 - C1 -4XGK 13.8 ?
34 PsiBlast_CBE 84.7476%-100 - C1 -4XGK 13.3 ?
12 PsiBlast_PDB 72.2642% -96 - C1 -3KYB 12.4 GLF1_KLEPN
10 PsiBlast_PDB 72.1442% -94 - C1 -3INR 13.7 GLF1_KLEPN
9 PsiBlast_PDB 72.0842% -95 - C1 -3GF4 13.1 GLF1_KLEPN
120 HHSearch 71.7242% -91 - C1 -2BI7 13.4 GLF1_KLEPN
11 PsiBlast_PDB 71.6442% -95 - C1 -3INT 13.4 GLF1_KLEPN
36 PsiBlast_CBE 71.5442% -94 - C1 -3KYB 13.3 GLF1_KLEPN
38 PsiBlast_CBE 71.3742% -93 - C1 -3GF4 11.5 GLF1_KLEPN
35 PsiBlast_CBE 71.3643% -93 - C1 -1I8T 13.6 GLF_ECOLI
106 Fugue 70.9043% -88 - C1 -1I8T 13.9 GLF_ECOLI
8 PsiBlast_PDB 70.9043% -89 - C1 -1I8T 13.9 GLF_ECOLI
37 PsiBlast_CBE 70.4542% -92 - C1 -3INT 12.6 GLF1_KLEPN
39 PsiBlast_CBE 70.0844% -88 - C1 -4MO2 14.3 ?
13 PsiBlast_PDB 70.0543% -90 - C1 -2BI7 13.4 GLF1_KLEPN
14 PsiBlast_PDB 69.8643% -92 - C1 -2BI8 12.8 GLF1_KLEPN
15 PsiBlast_PDB 69.8443% -94 - C1 -1WAM 13.6 GLF1_KLEPN
117 HHSearch 69.0944% -81 - C1 -1I8T 13.9 GLF_ECOLI
16 PsiBlast_PDB 68.6944% -85 - C1 -4MO2 14.3 ?
119 HHSearch 68.0843% -83 - C1 -4MO2 14.2 ?