@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0430: (2016-01-04 )
MVASKEPIMSQSERRFSFEFFPAKTEAGHEKLLATARNLAGYKPDFFSCTYGAGGSTRDRTLSTVLQLDGEVKVPTAPHLSCVGDSKAELRELLGRYREAGIRRIVALRGDLPSGMGMASGELRYANELVDFIRTETGDHFHIEVAAYPEVHPQARSFEDDLANFVRKVKAGASSAITQYFFNADAYFYFVERVAKLGVDIPVVPGIMPITNYSKLARFSDACGAELPRWIRKQLEAYGDDSRSIQAFGEQVISEMCERLLEGGAPGLHFYTLNQADPSLAIWKNLQLPR

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_K_11(1ZRQ)
METF_ECOLI
[Raw transfer]




FAD_K_11(2FMN)
METF_ECOLI
[Raw transfer]




FAD_J_10(1ZRQ)
METF_ECOLI
[Raw transfer]




FAD_E_5(2FMN)
METF_ECOLI
[Raw transfer]




FAD_G_7(2FMN)
METF_ECOLI
[Raw transfer]




FAD_M_13(1ZP3)
METF_ECOLI
[Raw transfer]




FAD_M_13(2FMO)
METF_ECOLI
[Raw transfer]




FAD_A_4(3FST)
METF_ECOLI
[Raw transfer]




FAD_B_2(1V93)
?
[Raw transfer]




FAD_B_8(1B5T)
METF_ECOLI
[Raw transfer]




FAD_K_11(1ZP4)
METF_ECOLI
[Raw transfer]




C2F_I_9(1ZP4)
METF_ECOLI
[Raw transfer]




FAD_C_9(1B5T)
METF_ECOLI
[Raw transfer]




FAD_A_7(1B5T)
METF_ECOLI
[Raw transfer]




FAD_K_11(1ZP3)
METF_ECOLI
[Raw transfer]




FAD_L_12(1ZP4)
METF_ECOLI
[Raw transfer]




C2F_H_8(1ZP4)
METF_ECOLI
[Raw transfer]




FAD_J_10(1ZP3)
METF_ECOLI
[Raw transfer]




FAD_E_6(3FST)
METF_ECOLI
[Raw transfer]




FAD_K_11(1ZPT)
METF_ECOLI
[Raw transfer]




FAD_A_7(1B5T)
METF_ECOLI
[Raw transfer]




FAD_M_13(1ZRQ)
METF_ECOLI
[Raw transfer]




FAD_M_13(1ZPT)
METF_ECOLI
[Raw transfer]




FAD_A_4(3FSU)
METF_ECOLI
[Raw transfer]




FAD_E_8(3FSU)
METF_ECOLI
[Raw transfer]




FAD_A_4(3FST)
METF_ECOLI
[Raw transfer]




FAD_J_10(1ZP4)
METF_ECOLI
[Raw transfer]




FAD_A_3(3APT)
?
[Raw transfer]




FAD_J_10(1ZPT)
METF_ECOLI
[Raw transfer]




FAD_A_3(3APT)
?
[Raw transfer]




FAD_C_6(3FSU)
METF_ECOLI
[Raw transfer]




FAD_L_12(2FMO)
METF_ECOLI
[Raw transfer]




4HF_L_12(2FMN)
METF_ECOLI
[Raw transfer]




FAD_O_15(2FMO)
METF_ECOLI
[Raw transfer]




FAD_C_5(3FST)
METF_ECOLI
[Raw transfer]




4HF_I_9(2FMN)
METF_ECOLI
[Raw transfer]




6 PsiBlast_PDB 96.4840%-113 - C8 -1ZRQ 13.0 METF_ECOLI
31 PsiBlast_CBE 95.3140%-111 - C8 -1ZPT 12.7 METF_ECOLI
5 PsiBlast_PDB 94.9340%-119 - C8 -1ZPT 12.5 METF_ECOLI
43 PsiBlast_CBE 94.8839%-116 - C8 -3FST 12.0 METF_ECOLI
11 PsiBlast_PDB 94.8739%-109 - C8 -3FST 13.0 METF_ECOLI
57 HHSearch 94.8641%-104 - C8 -3APT 12.0 ?
30 PsiBlast_CBE 94.8540%-109 - C8 -1ZRQ 13.3 METF_ECOLI
4 PsiBlast_PDB 94.8040%-111 - C8 -1ZP3 12.4 METF_ECOLI
34 PsiBlast_CBE 94.6640%-111 - C8 -1ZP3 12.8 METF_ECOLI
33 PsiBlast_CBE 94.6540%-111 - C8 -1ZP3 13.2 METF_ECOLI
7 PsiBlast_PDB 94.4039%-115 - C8 -1ZP4 13.2 METF_ECOLI
39 PsiBlast_CBE 94.3839%-111 - C8 -2FMN 13.1 METF_ECOLI
45 PsiBlast_CBE 94.3639%-119 - C8 -3FSU 12.4 METF_ECOLI
32 PsiBlast_CBE 94.3640%-110 - C8 -1ZPT 13.0 METF_ECOLI
29 PsiBlast_CBE 94.0940%-108 - C8 -1ZRQ 13.4 METF_ECOLI
36 PsiBlast_CBE 94.0539%-114 - C8 -1ZP4 13.1 METF_ECOLI
23 PsiBlast_CBE 94.0242%-102 - C8 -3APY - ? -
38 PsiBlast_CBE 93.7939%-112 - C8 -2FMO 13.1 METF_ECOLI
48 Fugue 93.7239%-106 - C8 -1B5T 13.3 METF_ECOLI
35 PsiBlast_CBE 93.6739%-109 - C8 -1ZP4 13.5 METF_ECOLI
37 PsiBlast_CBE 93.6639%-113 - C8 -2FMO 12.4 METF_ECOLI
12 PsiBlast_PDB 93.5239%-111 - C8 -3FSU 13.1 METF_ECOLI
44 PsiBlast_CBE 93.4339%-109 - C8 -3FST 13.4 METF_ECOLI
40 PsiBlast_CBE 93.3339%-111 - C8 -2FMN 13.2 METF_ECOLI
9 PsiBlast_PDB 93.2639%-114 - C8 -2FMO 12.9 METF_ECOLI
1 PsiBlast_PDB 93.2042%-102 - C8 -1V93 12.5 ?
10 PsiBlast_PDB 92.9340%-108 - C8 -1B5T 13.3 METF_ECOLI
2 PsiBlast_PDB 92.8842%-102 - C8 -3APT 12.0 ?
46 PsiBlast_CBE 92.8739%-111 - C8 -3FSU 13.2 METF_ECOLI
8 PsiBlast_PDB 92.6839%-109 - C8 -2FMN 13.1 METF_ECOLI
42 PsiBlast_CBE 92.2940%-108 - C8 -1B5T 13.1 METF_ECOLI
41 PsiBlast_CBE 92.2940%-113 - C8 -1B5T 12.4 METF_ECOLI
58 HHSearch 89.6836% -97 * C8 *3FST 13.0 METF_ECOLI