@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3809: (2016-02-21 )
MPQIVILPHADHCPEGAVFEAKPGETILDAALRNGIEIEHACEKSCACTTCHVIVREGLDSMEPSDELEDDMLDKAWGLEPDSRLSCQAVVADEDLVVEIPKYTINQVSEGH

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FES_C_6(1I7H)
FER_ECOLI
[Raw transfer]




FES_A_4(1I7H)
FER_ECOLI
[Raw transfer]




FES_B_5(1I7H)
FER_ECOLI
[Raw transfer]




FES_A_2(1UWM)
FER6_RHOCA
[Raw transfer]




FES_A_2(3AH7)
?
[Raw transfer]




FES_A_3(2BT6)
ADX_BOVIN
[Raw transfer]




FES_A_2(3AH7)
?
[Raw transfer]




FES_A_3(1AYF)
ADX_BOVIN
[Raw transfer]




FES_B_5(2Y5C)
ADXL_HUMAN
[Raw transfer]




FES_B_4(2WLB)

[Raw transfer]




FES_A_4(1XLQ)
PUTX_PSEPU
[Raw transfer]




FES_A_3(2WLB)
ETP1_SCHPO
[Raw transfer]




FES_A_2(3HUI)
?
[Raw transfer]




FES_A_3(2WLB)
ETP1_SCHPO
[Raw transfer]




FES_A_3(2Y5C)
ADXL_HUMAN
[Raw transfer]




FES_A_3(2Y5C)
ADXL_HUMAN
[Raw transfer]




1 PsiBlast_PDB 94.3280%-121 - C7 -1I7H 3.6 FER_ECOLI
22 PsiBlast_CBE 93.9780%-120 - C7 -1I7H 3.7 FER_ECOLI
21 PsiBlast_CBE 92.6680%-122 - C7 -1I7H 3.7 FER_ECOLI
95 HHSearch 82.6661%-114 - C7 -3AH7 3.8 ?
2 PsiBlast_PDB 82.2259%-114 - C7 -3AH7 3.8 ?
102 HHSearch 75.6135%-123 - C7 -1XLQ 3.3 PUTX_PSEPU
97 HHSearch 73.1639%-112 - C7 -2Y5C 2.5 ADXL_HUMAN
51 PsiBlast_CBE 72.5933%-109 - C7 -4JX1 - PUTX_PSEPU -
52 PsiBlast_CBE 72.3633%-113 - C7 -4JX1 - PUTX_PSEPU -
49 PsiBlast_CBE 72.3333%-112 - C7 -4JX1 - PUTX_PSEPU -
96 HHSearch 72.2138%-112 - C7 -3HUI 3.6 ?
50 PsiBlast_CBE 72.2033%-114 - C7 -4JX1 - PUTX_PSEPU -
100 HHSearch 72.1237%-118 - C7 -1UWM 3.5 FER6_RHOCA
101 HHSearch 71.4041%-117 * C7 *2WLB 3.7 ETP1_SCHPO
54 PsiBlast_CBE 71.2433%-110 - C7 -4JWU - PUTX_PSEPU -
53 PsiBlast_CBE 70.8433%-110 - C7 -4JWU - PUTX_PSEPU -
17 PsiBlast_PDB 69.9740%-106 - C7 -4LTU - ? -
41 PsiBlast_CBE 69.8940%-102 - C7 -4LTU - ? -
104 HHSearch 67.4332%-119 - C7 -2BT6 3.7 ADX_BOVIN
103 HHSearch 66.7633%-113 - C7 -3LXF - ? -
121 Fugue 58.2331% -83 - C7 -1AYF 3.7 ADX_BOVIN
24 PsiBlast_CBE 57.2842% -76 - C7 -2Y5C 2.8 ADXL_HUMAN
4 PsiBlast_PDB 56.4942% -69 - C7 -2Y5C 2.5 ADXL_HUMAN
3 PsiBlast_PDB 54.6950% -92 - C7 -2WLB 3.7 ETP1_SCHPO
23 PsiBlast_CBE 54.3250% -90 - C7 -2WLB 3.7