@TOME V3
(Feb 2022)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : 87_120_117490T0_kcl28: (2019-03-28 )
SPDRGLSRMCCVYKIHPGGNIWSTKKGEQAWFRRRFSKYEVMAYDRCNLEWGFSGKPRGLTF
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..-.-----...---------...-10-...----------..-...-.20---..------.----..-.--...-------------------30----....-----....--40-....-..-.---.---.50---..---...--...-60.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SP-D-----RGL---------S
R
M
-
C
--
C
V
Y
----------
K
I-HPG-GN----IW------S----TK-K--
G
E
Q
-------------------
A
W
----
F
R
R
R
-----FSKY--
E
--
V
M
A
Y
-
D
R
-C---
N
---
L
EW---GF---SGK--PRG-LTF
45
SP3
69.17
27%
49
* C15 *
-
1GCC
-
A:
[1-63]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
H
-
Y
-----
R
G
V
---------
R
Q
---------------------
R
P
W
-
G
K
FAAE
I
R
D-----
P
----
A
K
-
N
--
G
A
R
-------------------
V
W
----
L
G
-
T
-----
F
E
T
A
--
E
DA
A
L
A
Y
-
D
R
-
A
---
A
---
F
R
-----
M
---
R
G
S
--
R
A
L
-
L
N
F
4
Fugue
66.69
27%
23
- C14 -
0.28
2MYW
-
?
A:
[7-85]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
-
R
-----
E
N
L
YFQGHMAAP
A
R
F
-
C
--
V
Y
Y
----------
D
G
-
H
L
P
-
A
T
RVL-
L
M
------
Y
----
V
R
-
I
--
G
T
T
-------------------
A
T
----
I
T
A
R
-----
G
H
E
F
--
E
--
V
E
A
K
-
D
Q
-
N
---
C
---
K
V
I
---
L
T
---
N
G
K
QA
P
D
W
-
L
A
A
42
SP3
65.95
27%
0
- C- -
-
1JJ2
-
RL24E_HALMA
T:
[4-56]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
E
-
C
DY
C
G
T
----------
D
I
-
E
P
G
T
G
T
----
M
F
------
V
----
H
K
-
D
--
G
A
T
-------------------
T
H
----
F
C
S
-------
S
K
C
--
E
--
N
N
A
D
-
L
G
-
R
---
E
ARN
L
E
W
---
T
D
---
T
A
R
---------
9
Fugue
62.96
25%
-9
- C15 -
-
2E3P
1
C43BP_HUMAN
A:
[21-255]
THRFVQKVEEMVQNHMTYSLQDVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVETLADNAIIIYQTHKRVWPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEI
S
R
-
D
-----
N
I
L
---------
C
K
I
-
T
--
Y
V
A
----------
N
V
-
N
P
G
-
G
------
W
------
A
----
P
A
-
S
--
V
L
R
-------------------
A
V
----
A
K
R
E
-----
Y
P
K
F
--
L
--
K
R
F
T
-
S
Y
-
V
---
Q
---
E
K
T
--------
A
G
K
--
P
I
L
-
F
--
44
SP3
62.53
16%
77
- C14 -
0.28
1K3R
-
?
A:
[93-163]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHHPTG
K
P
-
V
-----
T
G
E
---------
Y
R
Q
-
G
--
L
T
V
----------
K
R
-
V
K
K
-
G
T
----
L
V
------
D
----
I
G
-
A
--
D
K
L
-------------------
A
L
----
C
R
E
K
-----
L
T
V
N
--
R
--
I
M
S
F
-
R
V
-
V
---
R
---
L
G
K
---
E
I
LIE
P
D
E
--
P
E
D
-
R
Y
W
6
Fugue
58.68
29%
81
- C15 -
-
4IP8
4
SAA1_HUMAN
A:
[1-105]
---------------------------------------------------------------------------------------------------------------------------------------MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYD
A
A
-
K
-----
R
G
----------------------------------
P
G
-
G
V
----
W
A
------
A
----
E
A
-
I
--
S
D
A
-------------------
R
E
----
N
I
Q
R
-----
F
F
G
H
GA
E
--
D
S
L
A
-
D
Q
-
A
---
A
---
N
E
W
---
G
R
---
S
G
K
--
D
P
N
-
H
F
R
46
SP3
57.41
17%
-
* C14 *
-
2IGD
-
?
?:
[1-61]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
---------
T
P
A
-
V
--
T
T
Y
----------
K
L
-
V
I
N
-
G
K
----
T
L
------
K
GETT
T
K
-
A
--
V
D
A
-------------------
E
T
----
A
E
K
A
-----
F
K
Q
Y
-------
A
N
-
D
N
G
V
---
D
---
G
V
W
---
T
Y
---
D
D
A
--
T
K
T
-
F
T
V
47
SP3
52.53
14%
-18
- C14 -
0.12
1HR0
-
IF1_THET8
W:
[1-71]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
K
E
-
K
-----
D
T
I
---------
R
T
E
-
G
--
V
V
T
----------
E
A
-
L
P
N
-
A
T
----
F
R
V-----
K
----
L
D
-
S
--
G
P
E
-------------------
I
L
AYIS
G
K
M
R
-----
M
H
Y
I
--
R
--
I
L
P
G
-
D
R
-
V
---
V
---
V
E
I
---
T
P
---
Y
D
P
--
T
R
G
R
I
V
Y
17
Fugue
52.51
14%
6
- C14 -
0.08
1BML
-
STRP_STREQ
C:
[285-372]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
P
F
D
-----
R
S
H
---------
L
K
L
-
F
--
T
I
K
----------
Y
V
-
D
V
N
-
T
N
----
E
L
------
L
----
K
S
-
E
--
Q
L
L
TASERNLDFRDLYDPRDKA
K
L
----
L
Y
N
N
-----
L
D
A
F
--
G
--
I
M
D
Y
-
T
L
-
T
G--
K
---
V
E
D
---
N
H
---
D
D
T
--
N
R
I
-
I
T
V
12
Fugue
50.97
22%
29
- C15 -
-
4RS7
-
?
A:
[375-461]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
D
-
L
-----
E
S
L
---------
Y
R
A
M
P
--
S
I
K
----------
K
L
-
V
D
E
-
G
K
----
L
-------
T
----
E
K
-
D
--
A
E
K
-------------------
V
Y
----
E
I
W
R
NMEAI
Y
K
Q
A
--
S
--
L
L
W
Y
-
N
T
-
V
---
D
---
L
L
L
KRI
G
L
---
S
E
K
--
E
R
E
-
E
I
F
50
SP3
48.19
22%
10
- C14 -
1HZ6
-
?
A:
[-2-64]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
M
---------
E
E
V
-
T
--
I
K
A
----------
N
L
I
F
A
N
-
G
S
----
T
Q
------
T
----
A
E
F
K
--
G
T
--------------------------
F
E
K
A
-----
T
S
----
E
--
A
Y
A
Y
A
D
T
-
L
KKD
N
---
G
E
W
---
T
V
---
D
V
A
--
D
K
G
-
Y
T
L
1
PsiBlast_PDB
46.69
32%
-93
- C13 -
-
4V91
-
RL3_YEAST
B:
[244-277]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
G
L
---------
R
K
V
-
A
--
C
I
G
----------
A
W
-
H
P
A
-
H
V
----
M
W
------
S
----
V
A
-
R
--
A
G
Q
-------------------
R
G
----
Y
H
S
R
-----
T
S
----------------------------------------------
5
Fugue
46.51
18%
14
- C15 -
-
3J2P
-
?
B:
[1-72]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVAL
V
P
-
H
-----
V
G
M
---------
G
L
E
-
T
--
A
T
E
----------
T
W
-
M
S
S
-
E
G
----
A
W
------
K
----
H
A
-
Q
--
R
I
E
-------------------
T
W
----
I
L
R
H
------
P
G
F
--
T
--
I
M
A
A
-
I
L
-
A
---
Y
---
T
I
----
G
T
---
T
H
F
--
Q
R
A
-
L
I
F
51
SP3
42.04
20%
77
- C14 -
0.28
1DCJ
-
TUSA_ECOLI
A:
[1-81]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTDLFS
S
P
-
D
HTLDA
L
G
L
---------
R
------
C
P
E
PVMMVRKTVR
N
M
-
Q
P
G
-
E
T
----
L
L
IIADDP
A
----
T
T
-
R
--
D
I
P
-------------------
G
F
----
C
T
F
-------
M
E
H
--
E
--
L
V
A
K
-
E
T
-
D
---
G
---
L
P
Y
---
R
Y
---
L
I
R
--
K
G
G
----
11
Fugue
40.71
16%
33
- C15 -
-
1Q3I
-
A:
[1-214]
-----------------------------------------------------------------------------MMTVAHMWFDNQIHEADTTTFDKRSPTWTALSRIAGLCNRAVFKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISYQLSIHEREDNPQSHVLVMKG
A
P
-
E
-----
R
I
L
---------
D
R
C
-
S
--
S
I
L
----------
V
Q
-
G
K
E
-
I
P
----
L
D
------
K
----
E
M
-
Q
--
D
A
F
-------------------
Q
N
----
A
Y
L
E
-----
L
G
G
L
--
G
--
E
R
V
L
-
G
F
-
C
---
Q
---
L
N
L
---
P
S
---
G
K
F
--
P
R
G
-
F
K
F
48
SP3
39.11
17%
146
- C14 -
-
1FBR
-
?
?:
[47-93]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRCN
D
Q
-
D
-----
T
R
T
---------
S
--------
Y
----------
R
I
-----
G
D
----
T
W
------
S
-----
K
-
K
--
D
N
R
-------------------
G
---------------
N
L
L
--
Q
--
C
I
C
T
-
G
N
-
G
---
R
---
G
E
W
--------
K
C
E
--
R
H
T
-
S
--
31
HHSearch
34.36
16%
-2
* C16 *
-
2QKM
-
DCP1_SCHPO
G:
[30-75]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
S
H
-
V
--
A
V
Y
----------
Q
F
-
D
V
G
-
S
Q
----
K
W
------
L
----
K
T
-
S
IE
G
T
F
-------------------
F
L
----
V
K
D
Q
-----
R
A
R
V
--
G
--
Y
V
I
L
-
N
R
-
N
---
S
---
P
E
---------------------
41
HHSearch
34.35
36%
53
- C17 -
-
5X90
-
?
D:
[54-75]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
--
F
V
Y
----------
S
I
-
H
D
S
-
G
S
----
K
L
------
S
----
T
S
-
K
--
S
Q
D
-------------------
M
F
-------------------------------------------------------------
40
HHSearch
33.72
36%
64
* C17 *
-
5X90
-
?
H:
[57-78]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
--
F
V
Y
----------
S
I
-
H
D
S
-
G
S
----
K
L
------
S
----
T
S
-
K
--
S
Q
D
-------------------
M
F
-------------------------------------------------------------
19
HHSearch
32.66
17%
-123
- C15 -
-
1SE7
-
?
A:
[47-64]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
--
N
L
R
-------------------
T
Y
----
F
M
E
R
-----
L
R
H
Y
--
R
--
Q
L
S
------------------------------------