@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1233: (2018-01-07 )
MKIRIDIPHHPYDIQIEKGCMAQAGQWLRELWQPQKVVIVTDNHVASLYAEKVKLSLEDAGFQVAVFDFLEGEERKNLTTVQKVYEFLVKQGLTRSDGIVALGGGVVGDLAGFVASTYMRGIHFVQIPTSLTAQVDSSIGGKTGVNTPFAKNMVGTFAQPDGVLIDPLVLETLGKRELIEGMGEVIKYGLIEDPELWALLTGLNGSVESILEHAETLIEHSCQVKRKMVVEDELDNGIRLYLNFGHTIGHAIEATAGYGKVMHGEAVAMGMVQISKIAEEKGLMPAGITQSITEMCQKFGLPVDYENWEVDKLYQALTHDKKARGNTLKLVLVPELGSATIHPVSLEEMKDYLVK

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_12(3OKF)
AROB_VIBCH
[Raw transfer]



NAD_A_5(1SG6)
ARO1_EMENI
[Raw transfer]



NAD_A_19(1NRX)
ARO1_EMENI
[Raw transfer]



NAI_A_3(4P53)
VALA_STRHJ
[Raw transfer]



NAD_A_6(1DQS)
ARO1_EMENI
[Raw transfer]



NAD_A_3(3OKF)
AROB_VIBCH
[Raw transfer]



NAD_B_8(1DQS)
ARO1_EMENI
[Raw transfer]



NAD_A_6(1DQS)
ARO1_EMENI
[Raw transfer]



NAD_A_3(3OKF)
AROB_VIBCH
[Raw transfer]



NAD_A_8(1NR5)
ARO1_EMENI
[Raw transfer]



NAD_B_6(1SG6)
ARO1_EMENI
[Raw transfer]



NAD_B_9(1NR5)
ARO1_EMENI
[Raw transfer]



NAD_B_20(1NRX)
ARO1_EMENI
[Raw transfer]



NAD_B_5(5EKS)
?
[Raw transfer]



NAD_B_6(1SG6)
ARO1_EMENI
[Raw transfer]



NAD_A_7(1NVB)
ARO1_EMENI
[Raw transfer]



NAD_A_3(5EKS)
?
[Raw transfer]



NAD_A_3(5EKS)
?
[Raw transfer]



NAD_A_2(5HVN)
AROB_FRATT
[Raw transfer]



NAD_A_2(5HVN)
AROB_FRATT
[Raw transfer]



ADP_B_12(1NVF)
ARO1_EMENI
[Raw transfer]



ADP_A_6(1NVA)
ARO1_EMENI
[Raw transfer]



GOL_A_9(2D2X)
DOIS_BACCI
[Raw transfer]



CRB_B_9(1NVB)
ARO1_EMENI
[Raw transfer]



CRB_B_6(1XAI)
AROB_STAAR
[Raw transfer]



CRB_B_15(1NVF)
ARO1_EMENI
[Raw transfer]



CRB_A_14(1NVF)
ARO1_EMENI
[Raw transfer]



CRB_A_5(1XAI)
AROB_STAAR
[Raw transfer]



CRB_A_9(1XAG)
AROB_STAAR
[Raw transfer]



CRB_A_6(1NVD)
ARO1_EMENI
[Raw transfer]



CRB_B_9(1NVB)
ARO1_EMENI
[Raw transfer]



CRB_C_16(1NVF)
ARO1_EMENI
[Raw transfer]



CRB_A_9(1XAG)
AROB_STAAR
[Raw transfer]



CRB_B_7(1NVD)
ARO1_EMENI
[Raw transfer]
49 HHSearch 96.0540% -94 - C3 -3OKF 8.0 AROB_VIBCH
1 PsiBlast_PDB 94.3742%-101 - C3 -3OKF 8.3 AROB_VIBCH
50 HHSearch 93.1840% -93 - C3 -3OKF 8.3 AROB_VIBCH
48 HHSearch 87.8537% -82 - C3 -5EKS 7.5 ?
40 HHSearch 81.3733% -74 - C3 -3QBE - AROB_MYCTU -
42 HHSearch 80.7230% -69 - C3 -1XAG 5.3 AROB_STAAR
51 HHSearch 79.2236% -45 - C3 -5HVN 7.9 AROB_FRATT
44 HHSearch 77.9036% -27 * C3 *3ZOK - DHQS_ACTCH -
38 PsiBlast_CBE 77.7232% -89 - C3 -1XAH - AROB_STAAR -
22 PsiBlast_CBE 77.7238% -26 - C3 -3ZOK - DHQS_ACTCH -
3 PsiBlast_PDB 77.0438% -26 - C3 -3ZOK - DHQS_ACTCH -
23 PsiBlast_CBE 76.8438% -23 - C3 -3ZOK - DHQS_ACTCH -
24 PsiBlast_CBE 76.3238% -25 - C3 -3ZOK - DHQS_ACTCH -
16 PsiBlast_PDB 76.3232% -95 - C3 -1XAH - AROB_STAAR -
5 PsiBlast_PDB 76.3136% -80 - C3 -3QBE - AROB_MYCTU -
21 PsiBlast_CBE 75.4639% -13 - C3 -5EKS 7.9 ?
45 HHSearch 75.3127% -65 - C3 -2GRU - DOIS_BACCI -
15 PsiBlast_PDB 74.2132% -31 - C3 -1XAG 5.3 AROB_STAAR
2 PsiBlast_PDB 73.9439% -16 - C3 -5EKS 7.5 ?
43 HHSearch 73.7730% -74 - C3 -1XAH - AROB_STAAR -
4 PsiBlast_PDB 72.3838% -39 - C3 -5HVN 8.0 AROB_FRATT
63 Fugue 71.3235% 1 - C3 -1DQS 9.6 ARO1_EMENI
17 PsiBlast_PDB 71.2332% -32 - C3 -1XAI 4.6 AROB_STAAR
54 HHSearch 69.9035% 1 - C3 -1SG6 8.6 ARO1_EMENI
37 PsiBlast_CBE 69.7632% -31 - C3 -1XAI 4.4 AROB_STAAR
55 HHSearch 68.9035% 10 - C3 -1NVB 4.7 ARO1_EMENI
14 PsiBlast_PDB 65.7035% -16 - C3 -1SG6 9.2 ARO1_EMENI
7 PsiBlast_PDB 65.1735% 0 - C3 -1NR5 9.5 ARO1_EMENI
25 PsiBlast_CBE 64.8335% -17 - C3 -1SG6 8.6 ARO1_EMENI
35 PsiBlast_CBE 64.2035% 0 - C3 -1NR5 8.9 ARO1_EMENI
27 PsiBlast_CBE 64.1635% 1 - C3 -1NVF 5.3 ARO1_EMENI
11 PsiBlast_PDB 64.0235% -3 - C3 -1NVB 6.8 ARO1_EMENI
31 PsiBlast_CBE 63.9335% -4 - C3 -1NVB 4.7 ARO1_EMENI
6 PsiBlast_PDB 63.8535% 3 - C3 -1DQS 9.7 ARO1_EMENI
26 PsiBlast_CBE 63.8035% 1 - C3 -1NVF 6.0 ARO1_EMENI
12 PsiBlast_PDB 63.7935% -4 - C3 -1NVD 5.4 ARO1_EMENI
13 PsiBlast_PDB 63.4835% 2 - C3 -1NVF 4.4 ARO1_EMENI
36 PsiBlast_CBE 61.7735% 17 - C3 -1DQS 9.2 ARO1_EMENI
8 PsiBlast_PDB 61.1135% -4 - C3 -1NRX 6.4 ARO1_EMENI
34 PsiBlast_CBE 60.9535% -8 - C3 -1NRX 5.7 ARO1_EMENI
30 PsiBlast_CBE 60.4335% 0 - C3 -1NVD 5.2 ARO1_EMENI