@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VNF6: (2017-11-14 )
MPRPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKAADGFALLDLEEAKRIRALGWTGPILLLEGVFSPQDLFDCVQYQLSFTIHSEAQIEWVEQHPYPAQFDVFLKMNSGMSRLGFKPQHYVQAWERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITAFEEIVKDLPGERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMSLRSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRISPTGTPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGTVGYELMCAVTARVQFINQV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DCS_C_6(3E6E)
?
[Raw transfer]



IN5_B_4(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_B_4(1BD0)
ALR_GEOSE
[Raw transfer]



DCS_A_4(3E6E)
?
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



UAH_B_23(5IRP)
ALR2_BACSU
[Raw transfer]



UAH_A_4(5IRP)
ALR2_BACSU
[Raw transfer]



PLP_B_7(3E5P)
?
[Raw transfer]



PLP_A_4(3E5P)
?
[Raw transfer]



PLP_A_5(1SFT)
ALR_GEOSE
[Raw transfer]



PLP_B_6(1SFT)
ALR_GEOSE
[Raw transfer]



GOL_B_18(4DYJ)
ALR_PSEPU
[Raw transfer]



TRS_B_24(5IRP)
ALR2_BACSU
[Raw transfer]



TRS_A_5(5IRP)
ALR2_BACSU
[Raw transfer]



CO2_B_21(5IRP)
ALR2_BACSU
[Raw transfer]



CO2_B_25(5IRP)
ALR2_BACSU
[Raw transfer]



ALA_B_6(4Y2W)
ALR1_CALS4
[Raw transfer]



PPI_A_5(3E5P)
?
[Raw transfer]



PPI_A_5(3E5P)
?
[Raw transfer]
59 HHSearch 97.9840% -70 - C3 -4WR3 - ALR1_ECOLI -
25 PsiBlast_CBE 96.9340% -71 - C3 -4WR3 - ALR1_ECOLI -
26 PsiBlast_CBE 96.4440% -69 - C3 -4WR3 - ALR1_ECOLI -
2 PsiBlast_PDB 96.3940% -71 - C3 -4WR3 - ALR1_ECOLI -
3 PsiBlast_PDB 95.6240% -71 - C3 -4XBJ - ALR1_ECOLI -
21 PsiBlast_CBE 95.4340% -73 - C3 -4XBJ - ALR1_ECOLI -
22 PsiBlast_CBE 94.9440% -74 - C3 -4XBJ - ALR1_ECOLI -
24 PsiBlast_CBE 94.5040% -69 - C3 -4WR3 - ALR1_ECOLI -
23 PsiBlast_CBE 94.4940% -68 - C3 -4XBJ - ALR1_ECOLI -
1 PsiBlast_PDB 90.2340% -46 - C3 -4QHR - ? -
28 PsiBlast_CBE 75.0733% -36 - C3 -1BD0 7.8 ALR_GEOSE
7 PsiBlast_PDB 75.0733% -14 - C3 -3E6E 6.0 ?
27 PsiBlast_CBE 74.9533% -34 - C3 -1SFT 5.8 ALR_GEOSE
5 PsiBlast_PDB 74.7833% -36 - C3 -1BD0 7.5 ALR_GEOSE
46 PsiBlast_CBE 74.7633% -18 - C3 -3E6E - ? -
4 PsiBlast_PDB 74.7133% -34 - C3 -1SFT 4.2 ALR_GEOSE
60 HHSearch 74.2133% -19 * C3 *3E5P 3.2 ?
48 PsiBlast_CBE 73.0833% -13 - C3 -3E5P 3.6 ?
45 PsiBlast_CBE 72.9933% -16 - C3 -3E6E 5.6 ?
19 PsiBlast_PDB 72.8829% -38 - C3 -3UW6 - ALR_GEOSE -
6 PsiBlast_PDB 72.8133% -15 - C3 -3E5P 4.2 ?
47 PsiBlast_CBE 72.2533% -12 - C3 -3E5P 3.2 ?
62 HHSearch 71.8133% -23 - C3 -1BD0 7.7 ALR_GEOSE