@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SA0145: (2016-03-12 )
MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMCKPTQNYIFNEQNNNGLSSLIIGRTTMSEAITSTEIENLDLLTAGPVPPNPSELIGSERFKELVDLFNKRYDIIIVDTPPVNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKALMEKAGSNILGVILNKTKVDKSSSYYHYYGDE

Atome Classification :

(20 SA) ----------------------------.........10........20........30........40........50........60........70........80........90..-.--.--.-...-------.100.......110---..-......120.......130..--.---...--.140.....--.-.150.......160.......170..------.....180.......190.......200--------..--.-....210.......220......----------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMCKPTQNYIFN-EQ-N--N--N-GLS-------SLIIGRTTMSEAI----TS-TEIENLDLLTAGPVPPNPSEL--I---GSE--RFKELVDLF--N-KRYDIIIVDTPPVNTVTDAQLYARAI------KDSLLVIDSEKNDKNEVKKAKALMEKAG--------SN--I-LGVILNKTKVDKSSSYYHYYGDE----------------------------
1 PsiBlast_PDB 97.1557% -78 - C1 -3BFV CAP8A_STAAU A:[42-256] ----------------------------MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFN-LP-N--N--E-GLS-------SLLLNWSTYQDSI----IS-TEIEDLDVLTSGPIPPNPSEL--I---TSR--AFANLYDTL--L-MNYNFVIIDTPPVNTVTDAQLFSKFT------GNVVYVVNSENNNKDEVKKGKELIEATG--------AK--L-LGVVLNRMPK-----------------------------------------
21 PsiBlast_CBE 96.6957% -76 - C1 -3BFV CAP8A_STAAU B:[42-256] ----------------------------MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFN-LP-N--N--E-GLS-------SLLLNWSTYQDSI----IS-TEIEDLDVLTSGPIPPNPSEL--I---TSR--AFANLYDTL--L-MNYNFVIIDTPPVNTVTDAQLFSKFT------GNVVYVVNSENNNKDEVKKGKELIEATG--------AK--L-LGVVLNRMPK-----------------------------------------
2 PsiBlast_PDB 96.4257% -73 - C1 -2VED ? A:[42-267] ----------------------------MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGMSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFN-LP-N--N--E-GLS-------SLLLNWSTYQDSI----IS-TEIEDLDVLTSGPIPPNPSEL--I---TSR--AFANLYDTL--L-MNYNFVIIDTPPVNTVTDAQLFSKFT------GNVVYVVNSENNNKDEVKKGKELIEATG--------AK--L-LGVVLNRMPKDKSASYYAYYG------------------------------
22 PsiBlast_CBE 95.9257% -73 - C1 -2VED ? B:[42-267] ----------------------------MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGMSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFN-LP-N--N--E-GLS-------SLLLNWSTYQDSI----IS-TEIEDLDVLTSGPIPPNPSEL--I---TSR--AFANLYDTL--L-MNYNFVIIDTPPVNTVTDAQLFSKFT------GNVVYVVNSENNNKDEVKKGKELIEATG--------AK--L-LGVVLNRMPKDKSASYYAYYG------------------------------
29 HHSearch 79.3035% -72 - C1 -3LA6 WZC_ECOLI A:[65-270] -----------------------------------------VGNPTDLAIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLG-TN-N--V--N-GLS-------EILIGQGDITTAA----KP-TSIAKFDLIPRGQVPPNPSEL--L---MSE--RFAELVNWA--S-KNYDLVLIDTPPILAVTDAAIVGRHV------GTTLMVARYAVNTLKEVETSLSRFEQNG--------IP--V-KGVILNSIFRRASA-------------------------------------
23 PsiBlast_CBE 75.9734% -68 - C1 -3CIO D:[74-274] --------------------------------------FLAVDNPADSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFT-VS-N--E--H-GLS-------EYLAGKDELNKVI----QH-FGKGGFDVITRGQVPPNPSEL--L---MRD--RMRQLLEWA--N-DHYDLVIVDTPPMLAVSDAAVVGRSV------GTSLLVARFGLNTAKEVSLSMQRLEQAG--------VN--I-KGAILN---------------------------------------------
30 HHSearch 74.8734% -64 - C1 -3CIO ETK_ECOLI A:[77-282] -----------------------------------------VDNPADSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFT-VS-N--E--H-GLS-------EYLAGKDELNKVI----QH-FGKGGFDVITRGQVPPNPSEL--L---MRD--RMRQLLEWA--N-DHYDLVIVDTPPMLAVSDAAVVGRSV------GTSLLVARFGLNTAKEVSLSMQRLEQAG--------VN--I-KGAILNGVIKRAST-------------------------------------
3 PsiBlast_PDB 74.0034% -68 - C1 -3CIO ETK_ECOLI A:[74-274] --------------------------------------FLAVDNPADSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFT-VS-N--E--H-GLS-------EYLAGKDELNKVI----QH-FGKGGFDVITRGQVPPNPSEL--L---MRD--RMRQLLEWA--N-DHYDLVIVDTPPMLAVSDAAVVGRSV------GTSLLVARFGLNTAKEVSLSMQRLEQAG--------VN--I-KGAILN---------------------------------------------
51 Fugue 72.5132% -60 - C1 -3CIO ETK_ECOLI A:[25-290] GVEAPEQLEEHGISVYATIPMSEWLDKRQQRHRTKNIPFLAVDNPADSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFT-VS-N--E--H-GLS-------EYLAGKDELNKVI----QH-FGKGGFDVITRGQVPPNPSEL--L---MRD--RMRQLLEWA--N-DHYDLVIVDTPPMLAVSDAAVVGRSV------GTSLLVARFGLNTAKEVSLSMQRLEQAG--------VN--I-KGAILNGVIKRASTAYSYGYNY-----------------------------
6 PsiBlast_PDB 64.4425% -68 - C1 -1G3R ? A:[7-172] -------------------------------------------------------------------------IVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLG-VD-D--P--DVTLH-------DVLAGEANVEDAI----YM-TQFDNVYVLP-GAVDWEHVLK--A---DPR--KLPEVIKSL--K-DKFDFILIDC-PAGLQLDAMSAMLSG------EEALLVTNPEISCLTDTMKVGIVLKKAG--------LA--I-LGFVLNR--------------------------------------------
5 PsiBlast_PDB 64.4425% -65 - C1 -1G3Q ? A:[7-172] -------------------------------------------------------------------------IVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLG-VD-D--P--DVTLH-------DVLAGEANVEDAI----YM-TQFDNVYVLP-GAVDWEHVLK--A---DPR--KLPEVIKSL--K-DKFDFILIDC-PAGLQLDAMSAMLSG------EEALLVTNPEISCLTDTMKVGIVLKKAG--------LA--I-LGFVLNR--------------------------------------------
17 PsiBlast_PDB 64.3522% -66 - C1 -4RZ3 ? A:[35-203] -------------------------------------------------------------------------VTSGKGGVGKSNVSLNFSLSLSKLGFRVLLLDMAIGMGNIDILLG-ES-S--S--L-ALA-------DWFSARLPLSELV----KS-GP-EHLSYIAGGTGAAQWQGLDTA---SID--RFLTELQAV--A-SQYDYLIFDM-GAGASGERLYFLKSV------DDVFVVTTPEPTAMTDAYAMMKYMHAAG--------SE--APFSVIVNRA-------------------------------------------
36 HHSearch 64.3021% -70 * C1 *3Q9L MIND_ECOLI A:[2-187] --------------------------------------------------------------------ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMG-CE-RRVV--Y-DFV-------NVIQGDATLNQAL----IKDKRTENLYILPASQTRDK--DA--L---TRE--GVAKVLDDL--KAMDFEFIVCDSPAGIE-TGALMALYFA------DEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPI--K-EHLLLTRYNPGR---------------------------------------
4 PsiBlast_PDB 64.2527% -70 - C1 -1ION ? A:[7-172] -------------------------------------------------------------------------IVSGKGGTGKTTVTANLSVALGEMGRKVLAVDGDLTMANLSLVLG-VD-D--V--NITLH-------DVLAGDAKLEDAI----YM-TQFENVYIL---PGAVDWEHV--I---KADPRKLPEVIKSL--K-GKYDFILIDCP-------AGLQLRAMSAMLSGEEAILVTNPEISCLTDTMKVGMVLKKAG--------LA--I-LGFILNR--------------------------------------------
31 HHSearch 64.0323% -62 - C1 -1G3Q ? A:[2-177] --------------------------------------------------------------------GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLG-VDDP--D--V-TLH-------DVLAGEANVEDAI----YM-TQFDNVYVLPGAVDWEHVL-K--A---DPR--KLPEVIKSL--K-DKFDFILIDCPAGLQLD-AMSAMLSG------EEALLVTNPEISCLTDTMKVGIVLKKAG--------LA--I-LGFVLNRYGRSD---------------------------------------
18 PsiBlast_PDB 62.3623% -70 - C1 -4V02 ? A:[5-177] -----------------------------------------------------------------------IVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAAIGLRNLDMILG-LE-N--RIVY-DIL-------DVLEGRVPYEKAL---------VKDKRGLSLWLLPA---DV--I---DIE--KWNKTVEEIKNS-GNYDYILVDS-PAGIEKGFQIAVSPA------DKALIVVNPEVSSIRDADRVIGLLESMD--------KR--N-YKVIVNRIK------------------------------------------
7 PsiBlast_PDB 62.3024% -68 - C1 -1HYQ - ? A:[2-171] --------------------------------------------------------------------VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEG-L--P--V-TLQ-------NVLAGEARIDEAIYVGPGG-VKVVPAGVSLEGLRKANP-----------E--KLEDVLTQI--M-ESTDILLLDA-PAGLERSAVIAIAAA------QELLLVVNPEISSITDGLKTKIVAERLG--------TK--V-LGVVVNR--------------------------------------------
60 Fugue 62.1520% -68 - C1 -3K9G ? A:[26-267] -------------------------------------------------------------------KPKIITIASIKGGVGKSTSAIILATLLSK-NNKVLLIDMDTQASITSYFYE-KI-E--K--L-GINFTKFNIYEILKENVDIDSTI----IN-VD-NNLDLIPSYLTLHNFSED--KIEHKDF--LLKTSLGTL--Y-YKYDYIVIDTNPSLDVTLKNAL-LCS------DYVIIPMTAEKWAVESLDLFNFFVRKLN--------LFLPI-FLIITRFKKNRTHKTLFEILKTKDRFLGTISENKDYIKEYENILEIFLKKI
33 HHSearch 61.3123% -63 - C1 -1HYQ - ? A:[2-176] --------------------------------------------------------------------VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILG-MEGL--P--V-TLQ-------NVLAGEARIDEAI----YV--GPGGVKVVPAGVSLEGLR-K--A---NPE--KLEDVLTQI--M-ESTDILLLDAPAGLER-SAVIAIAAA------QELLLVVNPEISSITDGLKTKIVAERLG--------TK--V-LGVVVNRITTLG---------------------------------------
16 PsiBlast_PDB 60.4623% -75 - C1 -4V03 ? A:[5-177] -----------------------------------------------------------------------IVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAD---RNLDMILG-LE-N--RIVY-DIL-------DVLEGRVPYEKAL---------VKDKRGLSLWLLP-----V--I---DIE--KWNKTVEEIKNS-GNYDYILVDS-PAGIEKGFQIAVSPA------DKALIVVNPEVSSIRDADRVIGLLESMD--------KR--N-YKVIVNRIK------------------------------------------