@TOME V2.3
(Nov 2016)

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0179: (2016-03-12 )
MVGMTRKKTLFWLCIFLLPNLLGFLIFIAIPILGSLGISFTDWDLVSTIHFTGFENYKRLFNDPEFWKSFRNTITFIIGYLPSVMILGLACALMLNQKIKLRPFFRAVYFLPVITSWVAVSLVWKWLFNPSYGLINYFLSLIGIAGPNWLTDPQTAMIAVIITSAWKDIGFVMVLFLGGLQNISPSYYEAANMDGASKLRQLFSITIPLLTPTTFFVTIISLINSFQVFDQVMIMTEGGPSGATMTLVQNIYNHAFRYFEMGYASAMSWILFIVIFIITIIQNKLQKRWSNY

Atome Classification :

(20 SA) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20........30........40-.......-..50------........60....----....70.----....--...80........90......--.-.100.......110-.......120.......130.......140........150.......160.......170.......180.......190.......200.......210.......220......-.230.......--------240-------........250-------......---..---260.......270.......280.......290
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVGMTRKKTLFWLCIFLLPNLLGFLIFIAIPILGSLGISF--TDWDLVS-TIHF------TGFENYKRLFNDPE----FWKSFRN----TITF--IIGYLPSVMILGLACALMLNQ--K-IKLRPFFRAVYFLP-VITSWVAVSLVWKWLFNPSYGLINYFLSL-IGIAGPNWLTDPQTAMIAVIITSAWKDIGFVMVLFLGGLQNISPSYYEAANMDGASKLRQLFSITIPLLTPTTFFVTIISLINSFQV-FDQVMIMTEGG--------PS--------GATMTLVQNI--------YNHAFR---YF---EMGYASAMSWILFIVIFIITIIQNKLQKRWSNY
8 PsiBlast_PDB 92.9831%-147 - C4 -3RLF MALF_ECOLI F:[259-503] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAI------------
11 PsiBlast_PDB 92.3131%-144 - C4 -4KI0 MALF_ECOLI F:[259-505] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAIVN----------
6 PsiBlast_PDB 91.9531%-145 - C4 -3PUW MALF_ECOLI F:[259-503] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAI------------
2 PsiBlast_PDB 91.8931%-148 - C4 -3PUY MALF_ECOLI F:[259-503] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAI------------
7 PsiBlast_PDB 91.7031%-147 - C4 -3PUX MALF_ECOLI F:[259-503] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAI------------
21 HHSearch 91.6431%-139 - C4 -3RLF MALF_ECOLI F:[257-503] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VT------TGWKNFTRVFTDEGIQKPFLAIFVW----TVVF--SLITVFLTVAVGMVLACLVQWE-A-LRGKAVYRVLLILP-YAVPSFISILIFKGLFNQSFGEINMMLSALFGVK-PAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGG--------PDRLGTTTPAGYTDLLVNYT--------YRIAFEGGGGQ---DFGLAAAIATLIFLLVGALAI------------
5 PsiBlast_PDB 91.5831%-145 - C4 -3PUV MALF_ECOLI F:[259-503] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAI------------
9 PsiBlast_PDB 90.5531%-142 - C4 -4JBW MALF_ECOLI F:[259-509] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAIVNLKAT------
3 PsiBlast_PDB 90.3631%-137 - C4 -3PUZ MALF_ECOLI F:[259-503] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAI------------
29 Fugue 90.2527%-138 - C4 -2R6G MALF_ECOLI F:[13-504] DALKWSVLGLLGLLVGYLVVLMYAQGEYLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTFERAQEVLLDRSWQAGKTYNFGLYPAGDEWQLALSDGETGKNYLSDAFKFGGEQKLQLKETTAQPEGERANLRVITQNRQALSDITAILPDGNKVMMSSLRQFSGTQPLYTLDGDGTLTNNQSGVKYRPNNQIGFYQSITANW--GDEKLSPGYTVT------TGWKNFTRVFTDEGIQKPFLAIFVW----TVVF--SLITVFLTVAVGMVLACLVQW--EALRGKAVYRVLLILP-YAVPSFISILIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGG--------PDRLGTTTPAGYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAIV-----------
1 PsiBlast_PDB 90.1031%-149 - C4 -2R6G MALF_ECOLI F:[259-504] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAIV-----------
4 PsiBlast_PDB 90.0531%-137 - C4 -3PV0 MALF_ECOLI F:[259-505] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAIVN----------
10 PsiBlast_PDB 90.0031%-139 - C4 -4KHZ MALF_ECOLI F:[259-505] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVFTDEG----IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAIVN----------
18 PsiBlast_CBE 89.6631%-147 - C4 -4JBW MALF_ECOLI H:[259-509] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGWKNFTRVF--------IQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWE--A-LRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSA-LFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRLGTTTPA--------GYTDLLVNYT--------YRIAFE---GGGGQDFGLAAAIATLIFLLVGALAIVNLKAT------
13 PsiBlast_PDB 88.6626%-131 - C4 -4TQV - ? A:[14-294] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYAMLLPTIIWFLIFLYKPMIG-LQMAFKQ----------PW------IGFDHFVTLFQSEQ----FIRAIKN----TLTL--SGLSLLFGFPMPILLALMINEVYS-KGYRKAVQTIVYLP-HFISIVIVAGLVVTFLSPSTGVVNNMLSW-IGLDRVYFLTQPEWFRPIYISSNIWKEAGFDSIVYLAAIMSINPALYESAQVDGATRWQMITRITLPCIVPTIAVLLVIRLGHILEVGFEYIILLYQPT--------TY--------ETADVISTYI--------YRLGLQ---GA---RYDIATAAGIFNAVVALVIVLFANHMSRR----
12 PsiBlast_PDB 88.1426%-135 - C4 -4TQU - ? M:[14-294] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYAMLLPTIIWFLIFLYKPMIG-LQMAF------------PW------IGFDHFVTLFQSEQ----FIRAIKN----TLTL--SGLSLLFGFPMPILLALMINEVYS-KGYRKAVQTIVYLP-HFISIVIVAGLVVTFLSPSTGVVNNMLSW-IGLDRVYFLTQPEWFRPIYISSNIWKEAGFDSIVYLAAIMSINPALYESAQVDGATRWQMITRITLPCIVPTIAVLLVIRLGHILEVGFEYIILLYQPT--------TY--------ETADVISTYI--------YRLGLQ---GA---RYDIATAAGIFNAVVALVIVLFANHMSRR----
19 HHSearch 80.4017%-140 - C4 -2ONK - WTPB_ARCFU C:[24-275] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRLLFSALLALLSSIILLFVLLPVAATVTLQL--F------------------NFDEFLKAASDPA----VWKVVLT----TYYA--ALISTLIAVIFGTPLAYILARK-S-FPGKSVVEGIVDLP-VVIPHTVAGIALLVVFGS-SGLIGSFSP-------LKFV----DALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISE-FGAVVVIAY-Y--------P------------MIAPTLI--------YERY-L---SE---GLSAAMPVAAILILLSLAVFVALRIIVG-----
30 Fugue 78.9815%-125 - C4 -2ONK - WTPB_ARCFU C:[24-275] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRLLFSALLALLSSIILLFVL--LPVAATV-TLQL------FNFDEFLKAASDPA----VWKVVLT----TYYA--ALISTLIAVIFGTPLAYILARK-S-FPGKSVVEGIVDLP-VVIPHTVAGIALLVVFGSS------------GLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISE-FGAVVVIA-----------YY--------PMIAPTLIYE--------RYLSEG---LS---A---AMPVAAILILLSLAVFVALRIIVG-----
31 Fugue 74.7719%-134 - C4 -4TQU - ? N:[2-284] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LATPFYSRSDRIFGIVNAVLLGIFALCALYPIIYIFSMSI--SSGAAVT-QGRVFLLPVDIDFSAYGRVLHDKL----FWTSYAN----TIFYT-VFGVVTSLIFIVPGAYALSKP--R-IRGRRVFGFIIAFT-MWFNA---------------GMIPFFLNM-RDL----GLLDNRFGILIGFACN-----AFNIILMRNYFESISASFEEAARMDGANDLQILWKVYIPLAKPALATITLLCAISRWNG-YFWAMVLLRAE--------EK--------IPLQVYLKKTIVDLNVNEEFAGAL---LT---NSYSMETVVGAIIVMSIIPVIIVYPVVQKYFTK
20 HHSearch 72.3917%-131 - C4 -3D31 - ? C:[44-283] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLLVLFLFIFLTLSNMIFEQI--TE-----------------DFSGLVKAAGNRS----VISSIFL----SLYA--GFLATLLALLLGAPTGYILARF-D-FPGKRLVESIIDVP-VVVPHTVAGIALLTVFGS-RGLIGEPLES-YI----QF----RDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISE-FGAVVILAY-Y--------P------------MVGPTLI--------YDRF-I---SY---GLSASRPIAVLLILVTLSIFLVIR---------