@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : gbs1037: (2015-12-05 )
MRESIFEETAKGKVSRHVLLTILLALILLFTADFLTYIIIELIISLDFWKLEWDSDIVQLIILLATSISTVMLFMWVKFKEKRPISSLGLFKEGALTELSRGWLVESVLFGACLILTIISGSGVIETVRFTADKLIWFLIFAVGWQVQSASVEILCRGWLLPVSATKYSKIVSVSISSIFFGLLHSANNHVSLISIFNLCLFGLFLSLYVILKGNIWGACGIHGAWNCVQGSVFGIEVSGEPMLSNSLVHVKTYGADWISGGKFGVEGSMITSIVLIVACYWLYQKSNFPYD
Atome Classification :
(12 SA)
-------------------------------------------------.........10-----..------------..---...-.20..----..-----....30.----....-...40-----....-----..-----------.-..-50..---------------------...---...60..----......70.------------..------.....80.--......--------.----90..-....-..--100-----------------........110.-----....---.----.120----...-------------.....130...-------....140----.......-150.--......160....---.--..-170..------.....180...-----....----190......----.200..--..-------...210.......220.......230.--..-----....240-.........250.....--..260......----------.-.270-........280......-.290
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-------------------------------------------------M
R
E
S
I
F
E
E
T
AK-----G
K
------------
V
S
---
R
H
V
-
L
L
T
I
L
----
L
A
-----
L
I
L
L
F
T
A
----
D
F
L
T
-
Y
I
I
I
------
E
L
I
I
-----SL-----------
D
-
F
W
-
K
LEW---------------------D
S
D
---
I
V
Q
L
I
I
L
----
L
A
T
S
I
S
T
V
M
------------
L
F
------
M
W
V
K
FKEK--RPISSL--------G----LFKE-
G
A
L
T
-
E
L
--
S
R
------------------
G
W
L
V
E
S
V
L
F
G
A
C
-----
L
I
L
T
---
I
----ISG-----S
G
V
-------------
I
E
T
V
R
F
T
A
D
K
L
-------
I
W
F
L
I
F
A
----VG
W
Q
V
QS-A
S
V
E
--
I
L
C
RG
W
L
LPVSAT---
K
--
Y
S
-
K
I
V
S
V
------
S
I
S
S
I
F
F
G
L
L
H-----SANN----H
V
S
L
I
S
I
F
N
----
L
C
L
F
G
L
--
F
L
-------
S
L
Y
V
I
LKGNI
W
G
ACGIHGA
W
N
CVQG
S
V
--
F
G
-----
I
E
VSG---EPMLSN
S
L
V
H
V
K
TYGAD--WISG-GKFGVE----------
G
-
S
M
I
--
T
S
I
V
L
I
V
A
C
Y
W
L
Y
QKSN-FPYD
6
Fugue
88.91
15%
-143
- C4 -
4TXD
1
?
A:
[21-369]
---------------------------------------------KRD
V
L
A
E
L
G
L
G
D
L
R
P
Y
L
R
S
I
G
D
------------
K
D
---
R
I
F
-
P
K
A
H
R
----
I
E
-----
V
V
F
L
V
R
A
----
A
N
Y
L
-
L
L
R
T
------
E
G
A
G
-----
T
I
-----------
N
-
M
T
-
T
L
E
Y
---------------------
S
G
G
---
A
M
E
V
P
V
I
Q
P
Q
K
L
M
A
V
T
R
R
Q
M
------------
L
Q
------
L
L
R
E
Y
R
D
S
--
L
D
E
V
S
K
--------
R
----
W
L
V
Q
-
E
V
I
G
-
K
A
--
K
D
L
GFKKVSEE
W
N
C
T
IQGMD
G
F
C
P
H
C
T
I
F
G
A
A
-----
L
T
E
Q
HNE
K
----
F
G
G
-----
L
S
I
-------------
G
I
K
T
R
V
R
F
D
P
------------
A
F
A
----
T
Q
R
R
I
T
P
-
E
T
H
N
--
K
V
T
E
G
H
-
L
S
M
T
G
Q
---
A
--
L
F
-
S
E
V
H
V
------
E
P
G
T
V
F
I
G
R
A
E
L
V
DLT
E
P
E
L
----
V
A
T
L
Y
S
L
A
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----
L
R
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L
G
G
--
R
S
-------
G
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Y
G
T
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V
K
A
G
K
Y
A
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T
T
--
A
Y
D
--
L
A
-----
A
E
N
A
G
KG
Y
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V
K
K
N
L
K
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R
L
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K
L
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F
T
--
P
V
D
N
-
S
K
L
L
A
A
V
DHKDPNG
L
F
K
-
D
L
W
--
R
S
S
I
D
F
A
E
K
M
V
K
W
V
E
E
L
-
K
G
G
G
12
Fugue
86.63
16%
-154
- C5 -
1SQ9
2
SKI8_YEAST
A:
[3-395]
K
V
F
I
A
T
A
NAGKAHDADIF
S
V
S
A
C
NS
F
T
V
S
C
S
GDG
Y
L
K
V
W
D
NKLLDNENP
K
D
K
S
Y
S
H
F
V
H
K
-----
S
G
------------
L
H
---
H
V
D
-
V
L
Q
A
I
ERDA
F
E
-----
L
C
L
V
A
T
T
S
FSG
D
L
L
F
-
Y
R
I
T
R
E
DETK
K
V
I
F
-----
E
K
L
DLLD
S
D
M
K
K
H
S
-
F
W
-
A
L
K
W
---------------------
G
A
S
---
N
S
H
R
L
V
A
----
T
D
V
K
-
G
T
T
Y
------------
I
W
------
K
F
H
P
F
A
D
E
--
S
N
S
L
T
L
--------
N
W
S
P
T
L
E
L
Q
-
G
T
V
E
S
P
M
--
T
P
------------------
S
Q
F
A
T
S
V
D
I
S
E
R
-----
G
L
I
A
---
T
----
G
F
N
-----
N
G
T
-------------
V
Q
I
S
E
L
S
T
L
R
P
-------
L
Y
N
F
E
S
Q
----
H
N
N
S
N
S
I
-
R
S
V
K
--
F
S
P
Q
G
S
L
L
A
I
A
H
D
---
S
NS
F
G
-
C
I
T
L
Y
E
TEFGE
R
I
G
S
L
S
V
P
G
E
F
-----
A
H
S
S
----
W
V
M
S
L
S
F
N
D
SGE
T
L
C
S
A
G
W
DG
K
L
-------
R
F
W
D
V
K
T
K
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R
I
T
T
L
N
M
H
C
D
D
I
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I
E
E
D
I
--
L
A
-----
V
D
E
H
G
---
D
S
L
A
E
P
G
V
F
D
V
K
F
L
K
K
G
--
W
R
S
G
-
M
G
A
D
L
N
------------
E
S
L
--
C
C
V
C
L
D
R
S
I
R
W
F
R
E
A
G
------
7
Fugue
84.58
19%
-153
* C5 *
4V1S
2
?
A:
[37-395]
---------------------PGVEIGNND
Y
Y
T
W
C
K
E
T
L
S
V
I
D
K
D
LKIS
G
T
H
S
Y
Y
E
N
Q
D
R
-----
S
Q
------------
V
S
FI
W
G
N
I
-
F
L
L
Y
T
----
Y
T
-----
E
G
I
S
L
S
K
----
S
E
W
S
-
D
A
L
M
------
N
C
F
L
-----
N
F
-----------
D
N
Y
W
-
H
P
N
Y
KG
I
A
G
Y
A
TLPTSAEKVPDRF
Y
D
E
N
---
G
W
T
A
I
G
L
----
C
D
A
Y
L
A
T
Q
N
------------
N
S
------
Y
L
E
K
A
K
G
A
--
L
A
F
S
L
S
G
EDNVLG
G
G
----
I
Y
F
Q
-
E
T
F
V
-
S
L
P
V
Q
K
------------------
N
T
I
C
S
A
V
T
M
L
S
C
-----
M
K
L
Y
---
E
----
I
T
Q
DR
Q
Y
L
D
A
A
-------------
I
R
I
N
D
W
T
V
E
N
L
LDKSDN
L
L
W
D
A
K
M
V
ADGS
V
N
T
Q
K
W
S
-
Y
N
A
G
--
F
M
I
R
S
W
L
K
M
Y
Q
A
T
KDE
K
--
Y
L
-
S
Q
A
K
A
------
T
L
A
S
S
E
A
K
W
Y
N
-----
S
I
N
G
----
A
L
N
D
P
G
Y
F
A
----
F
S
I
I
D
S
--
W
F
-------
D
M
Y
D
T
D
K
N
T
V
W
L
T
K
A
F
H
-
A
I
N
F
I
H
N
K
L
--
R
D
GNGRY
P
E
H
W
G
---
T
P
T
T
S
N
L
-----------------
E
K
Y
D
L
R
----------
F
-
S
T
V
--
A
A
Y
M
Y
M
R
A
A
N
Y
K
R
I
L
N
------
5
Fugue
81.60
24%
-51
- C3 -
3DU1
-
?
X:
[0-236]
-----------------------------------------------HM
N
V
G
E
I
L
R
H
Y
A
A
-----
G
K
------------
R
N
F--
Q
H
I
N
L
Q
E
I
E
----
L
T
-----
N
A
S
L
T
G
A
----
D
-
L
S
-
Y
A
------------------------------
D
-
L
R
-
Q
T
R
L
---------------------
G
K
S
---
N
F
S
H
T
C
L
----
R
E
A
D
L
S
E
A
I
------------
L
W
------------------------------
G
----
I
D
L
S
-
E
A
---
D
L
--
Y
R
------------------
A
I
L
R
E
A
D
L
T
G
A
K
-----
L
V
K
T
---
R
----
L
E
E
-----
A
N
L
-------------
I
K
A
S
--------------------
L
----
C
G
A
N
L
N
S
-
A
N
L
S
RC
L
L
F
Q
A
D
L
R
P
S
S
N
Q
---
R
--
T
D
L
G
Y
V
L
L
------
T
G
A
D
L
S
Y
A
D
L
R
-----
A
A
S
L
----
H
H
A
N
L
D
G
A
K
----
L
C
R
A
N
F
--
G
R
-------
T
---
I
Q
W
G
N
L
--
A
A
D
L
S
G
A
------
S
L
--
Q
G
-----
A
D
L
S
Y
---
A
N
L
E
S
A
I
L
R
K
A
N
L
Q
G
A
D
--
L
T
G
A
-
I
L
K
D
A
E
----------
L
-
K
G
A
--
I
M
-------------
P
D
-
G
S
I
H
11
Fugue
72.77
9%
-146
- C2 -
1QLT
2
VAOX_PENSI
A:
[6-273]
---------------------------------------------------
E
F
R
P
L
T
L
P
P
-----
K
-------------
L
S
---
L
S
D
-
F
N
E
F
I
----
Q
D
-----
I
I
R
I
V
G
S
----
E
N
V
E
-
V
I
S
V
------
D
G
S
Y
MKPTH
T
H
-----------
D
-
P
H
-
H
V
M
D
---------------------
Q
D
Y
---
F
L
A
S
A
I
V
----
A
P
R
N
V
A
D
V
Q
------------
S
I
------
V
G
L
A
N
K
F
S
--
F
P
L
W
P
I
--------
S
------------
I
-
G
R
--
N
S
------------------
G
Y
G
G
A
A
P
R
V
S
G
S
-----
V
V
L
D
---
M
------
G
-----
K
N
M
-------------
N
R
V
L
E
V
N
V
E
G
A
---------
Y
C
V
V
E
----
P
G
V
T
Y
H
D
-
L
H
N
Y
--
L
E
A
N
N
L
R
D
K
L
W
L
D
---
V
--
P
D
-
L
----------
G
G
G
S
V
L
G
N
A
V
E
-----
R
G
V
G
----
Y
T
P
Y
G
D
H
W
M
----
M
-------
H
S
-------
G
M
E
V
V
L
A
N
G
E
L
L
R
T
G
M
G
A
L
P
D
P
K
R
P
E
T
--
M
G
-----
L
K
P
E
D
---
Q
P
W
S
K
I
A
H
L
F
P
Y
G
F
G
P
Y
--
I
D
G
L
-
F
S
Q
S
N
M
----------
G
--
I
V
--
T
K
I
G
I
W
L
-----------
M
P
N
P
9
Fugue
72.40
17%
-105
* C4 *
4RWR
-
?
A:
[55-323]
-----------------------------------------------------
V
Y
R
E
K
Q
K
-------------------------------------------------
K
V
----
E
S
L
P
M
E
E
Y
V
------
T
G
V
V
-----
A
S
-----------
E
---M
N
A
S
F
---------------------
E
I
E
---
A
L
K
A
Q
A
L
----
A
A
R
T
F
V
V
Q
R
M
-----------
L
S
GGKKNN
A
D
V
T
D
T
D
Q
--
V
Y
K
S
K
E
--------
E
----
L
K
K
Q
W
G
N
N
Y
-
E
N
--
N
L
------------------
K
K
I
E
E
A
V
S
K
T
A
G
-----
Q
V
L
T
---
Y
EGKP
I
S
A
-----
S
F
F
-------------
S
T
S
N
G
R
T
E
N
A
--------------
A
----
D
Y
W
G
N
D
Y
-
P
Y
L
K
--
S
V
D
S
P
W
D
Q
A
S
P
K
F
---
T
--
S
E
-
Q
I
F
T
V
------
A
D
F
Q
K
R
L
G
V
K
V
-----
L
A
D
G
----
K
V
G
D
I
K
G
R
T
----
E
G
K
------
R
-------
V
K
D
V
A
F
Q
G
K
T
L
T
G
R
D
V
R
D
K
L
E
-
L
R
S
S
D
--
F
T
-----
W
K
Q
E
G
---
D
------
K
I
V
V
T
T
K
G
F
G
--
H
G
V
G
M
S
Q
Y
G
A
N
----------
G
M
A
A
E
GK
K
Y
T
D
I
V
A
H
Y
Y
K
G
V
E
I
K
T
M
N
D
Y
-
8
Fugue
70.47
13%
-134
- C4 -
1URO
1
DCUP_HUMAN
A:
[10-366]
---------------------------------------------GFPE
L
K
N
D
T
F
L
R
A
A
W
-----
G
E
ETD
Y
T
P
V
W
C
M
RQ
A
G
---
R
Y
L
-
P
E
F
R
E
----
T
R
A
AQD
F
F
S
T
C
R
S
P
----
E
A
C
C
-
E
L
T
L
------
Q
P
L
R
-----
R
F
-----------
P
-
L
D
-
A
A
I
I
---------------------
F
S
D
---
I
L
V
V
P
Q
A
----
L
G
M
E
V
T
M
V
P
GKGPSFPEPLRE
E
Q
------
D
L
E
R
L
R
D
P
--
E
V
V
A
S
E
--------
L
----
G
Y
V
F
-
Q
A
I
T
-
L
T
--
R
Q
------------------
R
L
A
G
R
V
P
L
I
G
F
A
GA
P
W
T
L
M
T
Y
---
M
----
V
E
G
-----
G
G
S
STM
A
Q
A
K
R
W
L
Y
QR
P
Q
A
S
H
Q
L
L
R
I
L
-------
T
D
A
L
V
P
Y
----
L
V
G
Q
V
V
A
G
A
Q
A
L
--
Q
L
F
E
S
H
A
G
H
L
G
P
Q
---
L
--
F
N
-
K
F
A
L
P
------
Y
I
R
D
V
A
K
Q
V
K
A
-----
R
L
R
E
A
G
L
A
P
V
P
M
I
I
F
A
K
----
D
G
H
F
A
L
--
E
E
L
A
Q
AGYE
V
V
G
L
D
W
T
V
A
P
K
K
A
R
E
C
V
G
K
T
V
T
L
Q
G
N
L
DP
C
A
-----
L
Y
A
S
E
---
E
E
I
G
Q
L
V
K
Q
M
L
D
D
F
G
P
H
R
Y
I
A
N
L
-
G
H
G
L
Y
P
----------
D
-
M
D
P
--
E
H
V
G
A
F
V
D
A
V
H
K
H
S
R
L
L
-
R
Q
--
4
Fugue
65.41
15%
-98
- C4 -
1YEW
2
PMOA_METCA
B:
[7-244]
----------------------------------------------------
A
V
R
S
H
A
E
A
-----
V
Q
------------
V
S
---
R
T
I
-
D
W
M
A
L
----
F
V
-----
V
F
F
V
I
V
G
----
S
Y
H
I
-
H
A
M
L
-------
T
M
G
-----
D
W
-----------
D
-
F
W
--
S
D
W
---------------------
K
D
R
RLW
V
T
V
T
P
I
V
----
L
V
T
F
P
A
A
V
Q
------------
S
Y
------
L
W
E
R
Y
R
L
P
W
G
A
T
V
C
V
L
--------
G
----
L
L
L
G
-
E
W
I
N
-
R
Y
--
F
N
------------------
F
W
G
W
T
Y
F
P
I
N
F
V
-----
F
P
A
S
---
L
----
V
P
G
-----
A
I
I
-------------
L
D
T
V
L
M
L
S
G
------------------------------------------------------
S
-
Y
L
F
T
A
------
I
V
G
A
M
G
W
G
L
I
F
-----
Y
P
G
N
----
W
P
I
I
A
P
L
-----------------------
H
V
P
V
E
Y
N
G
M
L
M
S
I
A
D
I
Q
G
Y
N
Y
V
R
T
G
T
P
--
E
Y
-----
I
R
M
V
E
---
K
G
T
L
-------
R
T
F
G
K
D
--
V
A
P
V
-
S
A
F
F
------------
S
-
A
F
M
--
S
I
L
I
Y
F
M
W
H
F
I
G
R
W
F
S
N
-
E
R
F
L
3
Fugue
30.79
34%
259
- C6 -
3RF3
-
IPAA_SHIFL
C:
[5-27]
-------------------------------------------------
T
R
E
T
I
F
E
A
S
K
K
-----
V
T
------------
N
S
---
L
S
N
-
L
I
S
L
I
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
HHSearch
23.60
16%
153
* C6 *
1IIJ
-
A:
[14-32]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
----------
V
-
G
V
L
--
L
F
L
I
L
V
V
V
V
G
I
L
I
K
R
R
R
-----
2
HHSearch
20.61
9%
630
- C1 -
2L6W
-
PGFRB_HUMAN
A:
[26-36]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
I
L
I
M
L
W
Q
K
-
K
P
R
Y
10
Fugue
18.34
15%
132
- C4 -
4TNJ
150
PSBT_THEEB
T:
[1-32]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
E
T
I
---
T
--
Y
V
-
F
I
F
A
C
------
I
I
A
L
F
F
F
A
I
F
F
-----
R
E
P
P
----
R
I
T
K
K
------------------------------------------------------------------------------------------------------------------------------------------