@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu38200: (2016-08-03 )
MREELKGIFASVFGEKEGLRFFFAPGRVNLIGEHTDYNGGHVFPCALTMGTYAAVAERNDGLVRMYSDNFRNAGIKECSLDDIRYQKEDDWANYPKGVIYEFQQRGYAVPHGFDIVFSGNIPNGAGLSSSASIELLMGVVLQSYFHPEVDALELVKMAQHAENHFIGVNCGIMDQFAIGMGKKHHAMLLNCDTLDYEYSKLNVSGLALVIANTNKKRTLADSSYNTRRQECNDALLDLKKGLDIAALGDIKPSDFDAHSSLIQNETNRRRAKHAVYENHRAIKTAHMFKENNIDEIGQLMKESHLSLKDDYEVTCPELDELVFAAWDHEGVIGSRMTGAGFGGCTISIVKDEFVDDFIQKVGDRYQEKTGLRADFYVADIGEGARELKGE

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MAP_A_3(2DEI)
GAL1_PYRHO
[Raw transfer]




APW_A_3(2DEJ)
GAL1_PYRHO
[Raw transfer]




GLA_A_2(2DEI)
GAL1_PYRHO
[Raw transfer]




GLA_A_2(1PIE)
GAL1_LACLA
[Raw transfer]




GLA_A_2(1PIE)
GAL1_LACLA
[Raw transfer]




GLA_A_2(1PIE)
GAL1_LACLA
[Raw transfer]




GOL_A_3(2CZ9)
GAL1_PYRHO
[Raw transfer]




GLA_A_3(2AJ4)
GAL1_YEAST
[Raw transfer]




DIO_C_3(1KKH)
MVK_METJA
[Raw transfer]




31 HHSearch 95.8347% -81 - C2 -1PIE 3.1 GAL1_LACLA
1 PsiBlast_PDB 94.7547% -81 - C2 -1PIE 3.1 GAL1_LACLA
21 Fugue 82.4347% 15 - C2 -1PIE 3.1 GAL1_LACLA
4 PsiBlast_PDB 81.5134% -99 - C2 -2DEJ 3.1 GAL1_PYRHO
3 PsiBlast_PDB 81.2934% -99 - C2 -2DEI 4.3 GAL1_PYRHO
34 HHSearch 81.2234% -97 - C2 -2CZ9 1.5 GAL1_PYRHO
2 PsiBlast_PDB 80.2634% -99 - C2 -2CZ9 - GAL1_PYRHO -
33 HHSearch 70.4039% 2 - C2 -1WUU - GALK1_HUMAN -
5 PsiBlast_PDB 69.3236% 9 - C2 -1WUU - GALK1_HUMAN -
35 HHSearch 60.8626% -4 - C2 -3V2U - GAL3_YEAST -
23 Fugue 54.4526% 15 - C2 -3V5R - GAL3_YEAST -
42 HHSearch 53.5620% -17 - C2 -4HAC - ? -
25 Fugue 51.9221% -12 - C2 -1KVK - KIME_RAT -
38 HHSearch 50.5622% 12 - C2 -1KVK - KIME_RAT -
24 Fugue 50.3117% -90 - C2 -2OI2 - ? -
39 HHSearch 49.8019% -3 - C2 -4USK - ? -
27 Fugue 47.5317% -81 * C2 *1H74 - KHSE_METJA -
29 Fugue 47.0716% -82 - C2 -1FWK - KHSE_METJA -
45 HHSearch 44.2816% -18 - C2 -3GON - ? -
47 HHSearch 44.1719% -18 - C2 -4P52 - ? -
6 PsiBlast_PDB 31.9430% -13 - C2 -2AJ4 3.4 GAL1_YEAST