@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00194_CAH12_: (2014-08-31 )
MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQGLQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFRRKSIKKGDNKGVIYKPATKMETEAHA

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

E1G_A_6(4KP8)
CAH12_HUMAN
[Raw transfer]




E1G_D_14(4KP8)
CAH12_HUMAN
[Raw transfer]




AZM_A_5(1JD0)
CAH12_HUMAN
[Raw transfer]




AZM_B_6(1JD0)
CAH12_HUMAN
[Raw transfer]




AZM_A_5(1JD0)
CAH12_HUMAN
[Raw transfer]




E1F_C_14(4KP5)
CAH12_HUMAN
[Raw transfer]




E1G_B_9(4KP8)
CAH12_HUMAN
[Raw transfer]




E1F_B_10(4KP5)
CAH12_HUMAN
[Raw transfer]




AZM_A_3(4LU3)
CAH14_HUMAN
[Raw transfer]




E1F_D_17(4KP5)
CAH12_HUMAN
[Raw transfer]




B30_A_5(2FOY)
CAH1_HUMAN
[Raw transfer]




B30_A_5(2FOY)
CAH1_HUMAN
[Raw transfer]




E1F_A_6(4KP5)
CAH12_HUMAN
[Raw transfer]




V50_B_12(4HT2)
CAH12_HUMAN
[Raw transfer]




V50_D_23(4HT2)
CAH12_HUMAN
[Raw transfer]




EZL_A_3(3MDZ)
CAH7_HUMAN
[Raw transfer]




V50_C_20(4HT2)
CAH12_HUMAN
[Raw transfer]




SUA_A_4(3K34)
CAH2_HUMAN
[Raw transfer]




AZM_A_3(3ML5)
CAH7_HUMAN
[Raw transfer]




ETS_A_4(3FW3)
CAH4_HUMAN
[Raw transfer]




AZM_A_4(4G7A)
?
[Raw transfer]




AZM_A_7(1RJ6)
CAH14_MOUSE
[Raw transfer]




AZM_A_6(3IAI)
CAH9_HUMAN
[Raw transfer]




GOL_A_7(3K34)
CAH2_HUMAN
[Raw transfer]




E1F_B_4(4KNN)
CAH13_HUMAN
[Raw transfer]




ACY_B_6(1JCZ)
CAH12_HUMAN
[Raw transfer]




ACY_A_5(1JCZ)
CAH12_HUMAN
[Raw transfer]




PPF_A_5(2IT4)
CAH1_HUMAN
[Raw transfer]




ACY_A_11(1KEQ)
CAH5A_MOUSE
[Raw transfer]




EDO_A_5(1J9W)
CAH1_HUMAN
[Raw transfer]




EDO_A_12(1JV0)
CAH1_HUMAN
[Raw transfer]




ACY_A_8(1RJ5)
CAH14_MOUSE
[Raw transfer]




PEG_B_10(4KP8)
CAH12_HUMAN
[Raw transfer]




EDO_B_11(4KP5)
CAH12_HUMAN
[Raw transfer]




EDO_D_18(4KP5)
CAH12_HUMAN
[Raw transfer]




EDO_C_21(4HT2)
CAH12_HUMAN
[Raw transfer]




PEG_D_15(4KP8)
CAH12_HUMAN
[Raw transfer]




EDO_A_7(4KP5)
CAH12_HUMAN
[Raw transfer]




EDO_B_14(4HT2)
CAH12_HUMAN
[Raw transfer]




PEG_A_7(4HT2)
CAH12_HUMAN
[Raw transfer]




4MZ_A_6(1KEQ)
CAH5A_MOUSE
[Raw transfer]




BME_A_9(1KOP)
CAH_NEIGO
[Raw transfer]




5 PsiBlast_PDB 97.56100%-106 - C1 -4KP8 4.2 CAH12_HUMAN
32 Fugue 97.53100%-106 - C1 -1JD0 2.9 CAH12_HUMAN
1 PsiBlast_PDB 97.3099%-104 - C1 -1JCZ 2.6 CAH12_HUMAN
28 PsiBlast_CBE 97.04100%-106 - C1 -4KP5 5.0 CAH12_HUMAN
29 PsiBlast_CBE 96.93100%-106 - C1 -4HT2 5.2 CAH12_HUMAN
30 PsiBlast_CBE 96.88100%-106 - C1 -4HT2 5.1 CAH12_HUMAN
23 PsiBlast_CBE 96.80100%-108 - C1 -4KP8 4.3 CAH12_HUMAN
21 PsiBlast_CBE 96.7599%-105 - C1 -1JD0 2.9 CAH12_HUMAN
3 PsiBlast_PDB 96.72100%-103 - C1 -4HT2 2.1 CAH12_HUMAN
25 PsiBlast_CBE 96.60100%-110 - C1 -4KP8 4.4 CAH12_HUMAN
22 PsiBlast_CBE 96.5899%-104 - C1 -1JCZ 2.6 CAH12_HUMAN
31 PsiBlast_CBE 96.43100%-107 - C1 -4HT2 5.0 CAH12_HUMAN
26 PsiBlast_CBE 96.43100%-101 - C1 -4KP5 5.4 CAH12_HUMAN
4 PsiBlast_PDB 96.36100%-105 - C1 -4KP5 5.2 CAH12_HUMAN
27 PsiBlast_CBE 96.34100%-101 - C1 -4KP5 4.9 CAH12_HUMAN
6 PsiBlast_PDB 79.7745% -92 - C1 -4LU3 3.0 CAH14_HUMAN
8 PsiBlast_PDB 77.6044% -94 - C1 -1RJ6 2.6 CAH14_MOUSE
7 PsiBlast_PDB 76.8044% -94 - C1 -1RJ5 3.7 CAH14_MOUSE
49 HHSearch 74.8039% -95 - C1 -3IAI 3.2 CAH9_HUMAN
11 PsiBlast_PDB 74.3539% -93 - C1 -3ML5 3.2 CAH7_HUMAN
12 PsiBlast_PDB 73.9539% -91 - C1 -3MDZ 4.1 CAH7_HUMAN
45 HHSearch 73.5036% -85 - C1 -4KNN 3.8 CAH13_HUMAN
19 PsiBlast_PDB 72.7636% -82 - C1 -2IT4 3.1 CAH1_HUMAN
44 HHSearch 72.3836% -84 - C1 -2FOY 4.1 CAH1_HUMAN
50 HHSearch 72.3435% -87 - C1 -3K34 3.8 CAH2_HUMAN
14 PsiBlast_PDB 72.2636% -81 - C1 -1JV0 3.2 CAH1_HUMAN
13 PsiBlast_PDB 72.0936% -82 - C1 -1J9W 3.1 CAH1_HUMAN
52 HHSearch 70.2235% -93 - C1 -3FW3 3.8 CAH4_HUMAN
56 HHSearch 65.6634% -86 - C1 -1KEQ 4.1 CAH5A_MOUSE
59 HHSearch 64.7834%-105 - C1 -1KOP 2.6 CAH_NEIGO
58 HHSearch 63.8032%-106 - C1 -4G7A 3.0 ?