@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00545_RNT1_A: (2014-09-11 )
MMYSKLLTLTTLLLPTALALPSLVERACDYTCGSNCYSSSDVSTAQAAGYQLHEDGETVGSNSYPHKYNNYEGFDFSVSSPYYEWPILSSGDVYSGGSPGADRVVFNENNQLAGVITHTGASGNNFVECT

Atome Classification :

(59 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3GP_A_3(4GSP)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1G02)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(4BU4)
RNT1_ASPOR
[Raw transfer]




3GP_A_3(5GSP)
RNT1_ASPOR
[Raw transfer]




2GP_B_8(1BVI)
RNT1_ASPOR
[Raw transfer]




2GP_A_4(1I2F)
RNT1_ASPOR
[Raw transfer]




2GP_A_4(1I2G)
RNT1_ASPOR
[Raw transfer]




2GP_A_4(1FYS)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1I2E)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(2BU4)
RNT1_ASPOR
[Raw transfer]




3GP_A_3(1LOV)
RNT1_ASPOR
[Raw transfer]




NACID_C_1(1B2M)
RNT1_ASPOR
[Raw transfer]

-

3GP_A_5(1RGC)
RNT1_ASPOR
[Raw transfer]




2GP_A_10(1I0X)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1I3I)
RNT1_ASPOR
[Raw transfer]




3GP_A_3(1RGA)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(3BU4)
RNT1_ASPOR
[Raw transfer]




3GP_A_3(6GSP)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1I3F)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1BU4)
RNT1_ASPOR
[Raw transfer]




2GP_B_2(1RNT)
RNT1_ASPOR
[Raw transfer]




2GP_D_11(1BVI)
RNT1_ASPOR
[Raw transfer]




2GP_D_14(1I0X)
RNT1_ASPOR
[Raw transfer]




3GP_A_3(1RLS)
RNT1_ASPOR
[Raw transfer]




2GP_D_11(4HOH)
RNT1_ASPOR
[Raw transfer]




2GP_A_4(1FZU)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1LRA)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1RHL)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(5BU4)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1I0V)
RNT1_ASPOR
[Raw transfer]




SGP_A_3(3GSP)
RNT1_ASPOR
[Raw transfer]




2GP_D_11(3HOH)
RNT1_ASPOR
[Raw transfer]




GPG_A_3(2RNT)
RNT1_ASPOR
[Raw transfer]




2GP_A_7(4HOH)
RNT1_ASPOR
[Raw transfer]




2GP_B_8(4HOH)
RNT1_ASPOR
[Raw transfer]




2GP_A_7(3HOH)
RNT1_ASPOR
[Raw transfer]




2GP_B_11(1I0X)
RNT1_ASPOR
[Raw transfer]




2GP_A_7(1BVI)
RNT1_ASPOR
[Raw transfer]




2GP_B_8(3HOH)
RNT1_ASPOR
[Raw transfer]




3GP_B_6(1RGC)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1HZ1)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1HYF)
RNT1_ASPOR
[Raw transfer]




SGP_A_3(2GSP)
RNT1_ASPOR
[Raw transfer]




GPC_A_2(1RDS)
RNMS_ASPPH
[Raw transfer]




2GP_B_6(5BIR)
RNT1_ASPOR
[Raw transfer]




SGP_A_3(1GSP)
RNT1_ASPOR
[Raw transfer]




NACID_C_1(1B2M)
RNT1_ASPOR
[Raw transfer]

-

SGP_F_6(7GSP)
RNT1_ASPOR
[Raw transfer]




SGP_E_5(7GSP)
RNT1_ASPOR
[Raw transfer]




PGP_A_2(3URP)
RNT1_ASPOR
[Raw transfer]




PGP_B_2(5RNT)
RNT1_ASPOR
[Raw transfer]




2AM_A_3(6RNT)
RNT1_ASPOR
[Raw transfer]




2GP_C_10(1BVI)
RNT1_ASPOR
[Raw transfer]




2GP_C_10(4HOH)
RNT1_ASPOR
[Raw transfer]




2AM_A_3(1RGK)
RNT1_ASPOR
[Raw transfer]




2GP_C_12(1I0X)
RNT1_ASPOR
[Raw transfer]




2GP_C_10(3HOH)
RNT1_ASPOR
[Raw transfer]




2AM_A_3(7RNT)
RNT1_ASPOR
[Raw transfer]




2GP_A_3(1RGL)
RNT1_ASPOR
[Raw transfer]




G_A_4(1RGA)
RNT1_ASPOR
[Raw transfer]




NACID_E_3(1B2M)
RNT1_ASPOR
[Raw transfer]

-

43 PsiBlast_CBE 98.7598%-114 - C8 -7RNT 4.2 RNT1_ASPOR
16 PsiBlast_PDB 98.4799%-111 - C8 -1RGA 5.8 RNT1_ASPOR
2 PsiBlast_PDB 98.26100%-110 - C8 -1B2M 5.2 RNT1_ASPOR
41 PsiBlast_CBE 98.2098%-119 - C8 -1RGL 4.5 RNT1_ASPOR
20 PsiBlast_PDB 98.0299%-114 - C8 -3GSP 7.6 RNT1_ASPOR
15 PsiBlast_PDB 97.9599%-110 - C8 -1GSP 5.2 RNT1_ASPOR
42 PsiBlast_CBE 97.6598%-120 - C8 -1RGK 4.8 RNT1_ASPOR
27 PsiBlast_CBE 97.5899%-117 - C8 -6RNT 4.0 RNT1_ASPOR
34 PsiBlast_CBE 97.5099%-110 - C8 -1RGC 5.4 RNT1_ASPOR
56 PsiBlast_CBE 97.4798%-112 - C8 -3HOH 6.2 RNT1_ASPOR
4 PsiBlast_PDB 97.47100%-109 - C8 -1RLS 5.3 RNT1_ASPOR
28 PsiBlast_CBE 97.4599%-112 - C8 -6GSP 4.6 RNT1_ASPOR
23 PsiBlast_CBE 97.39100%-106 - C8 -1B2M 3.4 RNT1_ASPOR
38 PsiBlast_CBE 97.3599%-111 - C8 -1BVI 6.2 RNT1_ASPOR
19 PsiBlast_PDB 97.3599%-107 - C8 -2RNT 7.6 RNT1_ASPOR
8 PsiBlast_PDB 97.2999%-113 - C8 -2BU4 5.3 RNT1_ASPOR
64 PsiBlast_CBE 97.2898%-112 - C8 -1FYS 5.3 RNT1_ASPOR
31 PsiBlast_CBE 97.2899%-112 - C8 -4GSP 7.0 RNT1_ASPOR
35 PsiBlast_CBE 97.2599%-106 - C8 -1I0X 6.2 RNT1_ASPOR
30 PsiBlast_CBE 97.2399%-110 - C8 -5GSP 4.8 RNT1_ASPOR
10 PsiBlast_PDB 97.2299%-106 - C8 -4BU4 6.2 RNT1_ASPOR
9 PsiBlast_PDB 96.7999%-112 - C8 -3BU4 5.5 RNT1_ASPOR
48 PsiBlast_CBE 96.7498%-111 - C8 -1FZU 6.0 RNT1_ASPOR
7 PsiBlast_PDB 96.6799%-111 - C8 -1BVI 5.7 RNT1_ASPOR
26 PsiBlast_CBE 96.6399%-105 - C8 -7GSP 5.4 RNT1_ASPOR
32 PsiBlast_CBE 96.5799%-107 - C8 -3URP 5.2 RNT1_ASPOR
18 PsiBlast_PDB 96.5099%-114 - C8 -2GSP 8.6 RNT1_ASPOR
54 PsiBlast_CBE 96.4198%-109 - C8 -4HOH 4.7 RNT1_ASPOR
50 PsiBlast_CBE 96.3898%-111 - C8 -1I2G 5.2 RNT1_ASPOR
52 PsiBlast_CBE 96.3798%-111 - C8 -4HOH 5.8 RNT1_ASPOR
37 PsiBlast_CBE 96.3099%-107 - C8 -1I0X 5.0 RNT1_ASPOR
36 PsiBlast_CBE 96.2699%-104 - C8 -1I0X 5.4 RNT1_ASPOR
40 PsiBlast_CBE 96.1599%-109 - C8 -1BVI 5.3 RNT1_ASPOR
49 PsiBlast_CBE 96.1498%-110 - C8 -1I3I 5.1 RNT1_ASPOR
63 PsiBlast_CBE 96.1298%-107 - C8 -1LOV 6.2 RNT1_ASPOR
12 PsiBlast_PDB 96.0799%-107 - C8 -1I0V 5.1 RNT1_ASPOR
14 PsiBlast_PDB 96.0399%-114 - C8 -1BU4 5.6 RNT1_ASPOR
6 PsiBlast_PDB 95.9099%-107 - C8 -7GSP 5.4 RNT1_ASPOR
58 PsiBlast_CBE 95.8598%-108 - C8 -3HOH 5.3 RNT1_ASPOR
46 PsiBlast_CBE 95.8198%-111 - C8 -1HZ1 5.1 RNT1_ASPOR
62 PsiBlast_CBE 95.7598%-105 - C8 -1LRA 5.8 RNT1_ASPOR
13 PsiBlast_PDB 95.7299%-109 - C8 -1I0X 6.1 RNT1_ASPOR
5 PsiBlast_PDB 95.7099%-116 - C8 -1RGC 5.6 RNT1_ASPOR
61 PsiBlast_CBE 95.6798%-112 - C8 -1G02 6.1 RNT1_ASPOR
47 PsiBlast_CBE 95.6698%-110 - C8 -1HYF 5.3 RNT1_ASPOR
44 PsiBlast_CBE 95.6598%-108 - C8 -1I2F 5.9 RNT1_ASPOR
39 PsiBlast_CBE 95.6499%-111 - C8 -1BVI 4.2 RNT1_ASPOR
59 PsiBlast_CBE 95.5898%-107 - C8 -3HOH 5.5 RNT1_ASPOR
55 PsiBlast_CBE 95.5498%-108 - C8 -4HOH 5.8 RNT1_ASPOR
57 PsiBlast_CBE 95.4998%-106 - C8 -3HOH 4.4 RNT1_ASPOR
53 PsiBlast_CBE 95.4998%-110 - C8 -4HOH 4.2 RNT1_ASPOR
45 PsiBlast_CBE 95.4098%-106 - C8 -1I2E 5.4 RNT1_ASPOR
17 PsiBlast_PDB 95.4099%-109 - C8 -1RNT 4.9 RNT1_ASPOR
51 PsiBlast_CBE 94.9998%-106 - C8 -1RHL 6.1 RNT1_ASPOR
65 PsiBlast_CBE 94.9898%-107 - C8 -5BIR 5.1 RNT1_ASPOR
11 PsiBlast_PDB 94.9399%-111 - C8 -5BU4 5.9 RNT1_ASPOR
60 PsiBlast_CBE 94.7398%-106 - C8 -1I3F 5.3 RNT1_ASPOR
29 PsiBlast_CBE 94.1899% -96 - C8 -5RNT 5.0 RNT1_ASPOR
78 HHSearch 82.6767%-103 * C8 *1RDS 7.8 RNMS_ASPPH