@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0276: (2015-11-29 )
MSLINPKVSAMFFDQIVTATDHNIAWEKIQNLLYNLYGEATYNSWLSSLKFVSSSNGEVLLSVPTRFIKEWITVHYMEKILLLWQNEDKSICSIDIQVTEEKNSSSSIISKNKEESVNNLGSPLDPRFTFDNFVVGKPNELAFTAAKRVAESIDPIPGSNPLFLYGGVGLGKTHLMHAIAWHIVNSPSAKRKVVYLSAEKFMYQYITALRSKDIMLFKEQFRSVDVLMVDDVQFISGKDSTQEEFFHTFNALIDQNKQLVISADRSPSDLDGVEERIKSRLGWGLVADINETTFELRLGILQAKVEQMNMYVPQDVLEFLARNIRSNIRELEGALNKVAHTSLIGRSMTVESASETLMDLLRSNHRSITIAEIQKKIAEFFNIKVTDMHSNRRLRSLVRPRQIAMYFAKKFTHKSLPDIGRSFGGRDHATVIHAVKQIENFIKTDSEFADEINQLRKMFK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_C_9(2Z4R)
DNAA_THEMA
[Raw transfer]



ADP_A_3(2Z4S)
DNAA_THEMA
[Raw transfer]



ADP_A_3(1L8Q)
DNAA_AQUAE
[Raw transfer]



ADP_A_3(2Z4S)
DNAA_THEMA
[Raw transfer]



ADP_A_3(1L8Q)
DNAA_AQUAE
[Raw transfer]



ADP_B_8(2Z4R)
DNAA_THEMA
[Raw transfer]



ADP_A_3(1L8Q)
DNAA_AQUAE
[Raw transfer]



ADP_A_7(2Z4R)
DNAA_THEMA
[Raw transfer]
31 Fugue 94.2735%-116 - C2 -1L8Q 8.0 DNAA_AQUAE
5 PsiBlast_PDB 90.9534%-110 - C2 -1L8Q 8.0 DNAA_AQUAE
41 HHSearch 90.7635%-104 - C2 -1L8Q 8.0 DNAA_AQUAE
25 PsiBlast_CBE 90.5534%-104 - C2 -3R8F - DNAA_AQUAE -
24 PsiBlast_CBE 89.7634%-103 - C2 -3R8F - DNAA_AQUAE -
23 PsiBlast_CBE 89.6234%-104 - C2 -3R8F - DNAA_AQUAE -
4 PsiBlast_PDB 89.4734%-100 - C2 -2HCB - DNAA_AQUAE -
3 PsiBlast_PDB 89.2934%-104 - C2 -3R8F - DNAA_AQUAE -
27 PsiBlast_CBE 88.7634%-100 - C2 -2HCB - DNAA_AQUAE -
26 PsiBlast_CBE 88.4834%-102 - C2 -2HCB - DNAA_AQUAE -
28 PsiBlast_CBE 87.7034% -96 - C2 -2HCB - DNAA_AQUAE -
21 PsiBlast_CBE 82.5235%-108 - C2 -2Z4R 7.4 DNAA_THEMA
2 PsiBlast_PDB 82.4635%-110 - C2 -2Z4S 7.1 DNAA_THEMA
1 PsiBlast_PDB 82.3735%-107 - C2 -2Z4R 7.1 DNAA_THEMA
22 PsiBlast_CBE 82.2135%-107 - C2 -2Z4R 7.3 DNAA_THEMA
40 HHSearch 81.3832%-110 * C2 *2Z4S 7.1 DNAA_THEMA
10 PsiBlast_PDB 59.5325% -79 - C2 -3SC3 - ? -
45 HHSearch 55.8917% -76 - C2 -3PFI - ? -
38 Fugue 49.7415% -43 - C1 -4UZY - ? -
47 HHSearch 49.6915% -93 - C2 -1SXJ - RFC5_YEAST -