@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0777: (2015-12-04 )
MLIRIGTRGSSLAIAQALEAKQKLLDLFSSLSVEIIKIKTSGDKYANANLAEIGGKGLFIKEIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKYKSLKSLPQQAIIATSSIRRKVQLLNFRPDLNIVPLRGNVTTRLQNQSFDGIILAEAGLIRLKKDYLITEVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCFTPLAALAKYVSENVLHLYCMLADKKNIYFTERTSFVEDAEKMGMDAGLELKSKCL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

18W_A_2(4HTG)
HEM3_ARATH
[Raw transfer]




DPM_B_2(1PDA)
HEM3_ECOLI
[Raw transfer]




DPM_A_2(2YPN)
HEM3_ECOLI
[Raw transfer]




DPM_A_2(1AH5)
HEM3_ECOLI
[Raw transfer]




DPM_A_2(1GTK)
HEM3_ECOLI
[Raw transfer]




DPM_B_2(1YPN)
HEM3_ECOLI
[Raw transfer]




DPM_A_2(1GTK)
HEM3_ECOLI
[Raw transfer]




DPM_A_3(3ECR)
HEM3_HUMAN
[Raw transfer]




ACY_C_3(1PDA)
HEM3_ECOLI
[Raw transfer]




6 PsiBlast_PDB 96.1141% -93 - C3 -4HTG 9.9 HEM3_ARATH
3 PsiBlast_PDB 95.4542% -88 - C3 -1PDA 9.4 HEM3_ECOLI
2 PsiBlast_PDB 95.2942% -88 - C3 -1GTK 8.7 HEM3_ECOLI
19 HHSearch 95.2542% -93 - C3 -1GTK 8.7 HEM3_ECOLI
5 PsiBlast_PDB 94.9442% -86 - C3 -1AH5 8.4 HEM3_ECOLI
1 PsiBlast_PDB 94.7542% -90 - C3 -2YPN 8.6 HEM3_ECOLI
4 PsiBlast_PDB 94.4642% -87 - C3 -1YPN 7.8 HEM3_ECOLI
20 HHSearch 89.2135% -94 * C3 *3ECR 7.8 HEM3_HUMAN
7 PsiBlast_PDB 85.6140% -92 - C3 -4MLQ - ? -
8 PsiBlast_PDB 85.5940% -93 - C3 -4MLV - ? -
39 Fugue 85.5448% -97 - C3 -1PDA - ? -
17 PsiBlast_CBE 83.3337% -99 - C3 -3ECR - HEM3_HUMAN -
18 PsiBlast_CBE 80.9537%-100 - C3 -3EQ1 - HEM3_HUMAN -
10 PsiBlast_PDB 80.8237% -99 - C3 -3EQ1 - HEM3_HUMAN -
9 PsiBlast_PDB 80.7037%-103 - C3 -3ECR - HEM3_HUMAN -
41 Fugue 49.9921% -39 * C4 *4OO3 - ? -
47 Fugue 49.5417% -43 - C4 -3G8Q - CDAT8_METKA -
42 Fugue 47.1019% -28 * C5 *4D79 - TCDA_ECOLI -
31 HHSearch 38.9015% -73 - C3 -1H3D - HIS1_ECOLI -
44 Fugue 38.0015% -33 - C5 -4P5F - ? -