@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0036: (2016-03-11 )
MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQLIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEYNMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIMPQYNRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVNKPARANQLANWGVDGIFTDNADKMVHLSQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G3P_A_5(3QVQ)
?
[Raw transfer]



G3P_B_21(3QVQ)
?
[Raw transfer]



EDO_A_8(3CH0)
?
[Raw transfer]



I3P_A_9(1DJX)
PLCD1_RAT
[Raw transfer]



EDO_A_9(3CH0)
?
[Raw transfer]



GOL_A_4(2PZ0)
?
[Raw transfer]



GOL_B_6(2PZ0)
?
[Raw transfer]



GOL_A_19(3CH0)
?
[Raw transfer]
1 PsiBlast_PDB 92.6534% -71 - C1 -2OTD - ? -
26 HHSearch 92.1735% -62 - C1 -2OTD - ? -
2 PsiBlast_PDB 91.5331% -65 - C1 -3QVQ - ? -
21 PsiBlast_CBE 91.2231% -66 - C1 -3QVQ - ? -
23 PsiBlast_CBE 90.0431% -67 - C1 -3QVQ 4.0 ?
22 PsiBlast_CBE 90.0431% -64 - C1 -3QVQ - ? -
27 HHSearch 89.7031% -65 - C1 -3QVQ 3.7 ?
24 PsiBlast_CBE 87.0231% -72 - C1 -2PZ0 2.7 ?
3 PsiBlast_PDB 86.9131% -72 - C1 -2PZ0 - ? -
30 HHSearch 85.8831% -66 - C1 -2PZ0 2.4 ?
37 HHSearch 82.0927% -74 - C1 -1VD6 - ? -
29 HHSearch 82.0622% -69 - C1 -2O55 - ? -
47 Fugue 81.4322% -78 - C1 -2O55 - ? -
33 HHSearch 79.9127% -65 - C1 -2OOG - ? -
32 HHSearch 79.7823% -67 * C1 *3L12 - ? -
12 PsiBlast_PDB 79.6729% -78 - C1 -3NO3 - ? -
4 PsiBlast_PDB 79.6428% -61 - C1 -2OOG - ? -
8 PsiBlast_PDB 78.7826% -64 - C1 -1ZCC - ? -
5 PsiBlast_PDB 78.2528% -55 - C1 -2P76 - ? -
16 PsiBlast_PDB 78.0523% -65 - C1 -3L12 - ? -