@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2317: (2016-04-03 )
MIRCAKKEDLNAILAIYNDAIINTTAVYTYKPQTIDERIAWFETKQRNHEPIFVFEENGSVLGFATFGSFRPWPAYQYTIEHSIYVDASARGKGIASQLLQRLIVEAKAKGYRTLVAGIDASNEASIKLHQKFNFKHAGTLTNVGYKFDYWLDLAFYELDLKD

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACO_A_12(3DR8)
MDDA_SALTY
[Raw transfer]



ACO_A_3(4JWP)
?
[Raw transfer]



GOL_B_14(2J8M)
MDDA_PSEA7
[Raw transfer]



EDO_C_14(4J3G)
?
[Raw transfer]



EDO_D_17(4J3G)
?
[Raw transfer]



EDO_B_10(4J3G)
?
[Raw transfer]



GOL_A_3(2J8R)
MDDA_PSEA7
[Raw transfer]



MSL_B_10(2J8R)
MDDA_PSEA7
[Raw transfer]



FLC_A_4(4JXQ)
?
[Raw transfer]



FLC_A_3(4JXR)
?
[Raw transfer]
21 PsiBlast_CBE 97.46100%-134 - C1 -4MBU - ? -
1 PsiBlast_PDB 95.76100%-126 - C1 -4MBU - ? -
2 PsiBlast_PDB 78.3847%-121 - C1 -2JLM - ? -
26 PsiBlast_CBE 78.2547%-122 - C1 -2JLM - ? -
5 PsiBlast_PDB 77.9546%-121 - C1 -2J8R 2.7 MDDA_PSEA7
3 PsiBlast_PDB 77.6246%-118 - C1 -2J8M - MDDA_PSEA7 -
24 PsiBlast_CBE 77.6147%-122 - C1 -2JLM - ? -
27 PsiBlast_CBE 77.5646%-118 - C1 -2J8R 2.9 MDDA_PSEA7
12 PsiBlast_PDB 77.3840%-122 - C1 -1YR0 - ? -
54 HHSearch 77.0840%-122 * C1 *1YR0 - ? -
7 PsiBlast_PDB 77.0746%-121 - C1 -2BL1 - MDDA_PSEAE -
28 PsiBlast_CBE 76.6246%-119 - C1 -2J8M 2.0 MDDA_PSEA7
22 PsiBlast_CBE 76.5647%-123 - C1 -2JLM - ? -
23 PsiBlast_CBE 76.4547%-121 - C1 -2JLM - ? -
4 PsiBlast_PDB 76.3446%-119 - C1 -2J8N - MDDA_PSEA7 -
58 HHSearch 76.1347%-116 - C1 -2JLM - ? -
9 PsiBlast_PDB 75.3043%-116 - C1 -3DR6 - MDDA_SALTY -
10 PsiBlast_PDB 74.9144%-122 - C1 -4J3G - ? -
30 PsiBlast_CBE 74.8844%-118 - C1 -4J3G 3.1 ?
31 PsiBlast_CBE 74.8044%-121 - C1 -4J3G 3.1 ?
8 PsiBlast_PDB 74.6843%-112 - C1 -3DR8 9.4 MDDA_SALTY
11 PsiBlast_PDB 74.0744%-117 - C1 -4JWP 9.3 ?
32 PsiBlast_CBE 73.9044%-121 - C1 -4J3G 3.2 ?
13 PsiBlast_PDB 67.8634%-101 - C1 -4JXQ 3.5 ?
14 PsiBlast_PDB 67.1834%-101 - C1 -4JXR 3.5 ?