@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0791: (2015-12-18 )
MIDDLIQKEFLAHKEALEKSLESLQDALKQSVHLLIETLENQGKILICGNGGSASDAQHFAAELTGRYKLERKGLSVISLSTDTSALTAIANDYGYEEVFARQVEALGNKEDILIGISTSGNSKNVLKAYEKAKDLGMKTLSLAGRDGGKMKPLSDIALIVPSGDTPRIQEMHILMIHILCDCIERHFARKN

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

M7P_B_3(1X92)
GMHA_PSEAE
[Raw transfer]




M7P_A_4(1X92)
GMHA_PSEAE
[Raw transfer]




M7P_A_4(1X92)
GMHA_PSEAE
[Raw transfer]




M7P_D_14(2XBL)
GMHA_BURPS
[Raw transfer]




M7P_B_9(2XBL)
GMHA_BURPS
[Raw transfer]




M7P_C_11(2XBL)
GMHA_BURPS
[Raw transfer]




M7P_A_6(2XBL)
GMHA_BURPS
[Raw transfer]




I22_B_5(2I22)
GMHA_ECOLI
[Raw transfer]




1 PsiBlast_PDB 90.6958% -93 - C3 -1TK9 - GMHA1_CAMJE -
21 PsiBlast_CBE 90.3948%-104 - C3 -1X92 3.4 GMHA_PSEAE
2 PsiBlast_PDB 89.4548%-105 - C3 -1X92 3.4 GMHA_PSEAE
41 HHSearch 87.9646% -99 * C3 *1X92 3.4 GMHA_PSEAE
3 PsiBlast_PDB 87.5947%-112 - C3 -3BJZ - GMHA_PSEAB (first) -
46 HHSearch 86.9959% -81 - C3 -1TK9 - GMHA1_CAMJE -
31 PsiBlast_CBE 86.9150%-110 - C3 -2X3Y - GMHA_BURPS -
25 PsiBlast_CBE 86.7550%-112 - C3 -2X3Y - GMHA_BURPS -
63 Fugue 86.5842%-105 - C3 -4U6N - DIAA_ECOLI -
22 PsiBlast_CBE 86.4750%-112 - C3 -2XBL 4.2 GMHA_BURPS
29 PsiBlast_CBE 86.0850%-109 - C3 -2X3Y - GMHA_BURPS -
30 PsiBlast_CBE 85.7750%-114 - C3 -2X3Y - GMHA_BURPS -
26 PsiBlast_CBE 85.7350%-111 - C3 -2X3Y - GMHA_BURPS -
5 PsiBlast_PDB 85.7050%-111 - C3 -2X3Y - GMHA_BURPS -
4 PsiBlast_PDB 85.5850%-109 - C3 -2XBL - GMHA_BURPS -
24 PsiBlast_CBE 85.5250%-111 - C3 -2XBL 4.1 GMHA_BURPS
45 HHSearch 85.4744%-102 - C3 -2XBL 4.0 GMHA_BURPS
23 PsiBlast_CBE 85.2850%-109 - C3 -2XBL 4.0 GMHA_BURPS
28 PsiBlast_CBE 85.1450%-109 - C3 -2X3Y - GMHA_BURPS -
27 PsiBlast_CBE 85.0050%-111 - C3 -2X3Y - GMHA_BURPS -
34 PsiBlast_CBE 82.9045% -98 - C3 -2I22 3.0 GMHA_ECOLI