@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0864: (2015-12-19 )
MSNPNLSFYCNECERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDSAKNSFVNLLGLKKASGYAQTLKTEILNDLNALEPTYLSLQENLNALLNTLFKGKT

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RIS_B_12(1RQJ)
ISPA_ECOLI
[Raw transfer]




RIS_A_10(1RQJ)
ISPA_ECOLI
[Raw transfer]




RIS_A_10(1RQJ)
ISPA_ECOLI
[Raw transfer]




IPE_D_24(3Q1O)
?
[Raw transfer]




IPE_C_18(3Q1O)
?
[Raw transfer]




IPE_A_7(3Q1O)
?
[Raw transfer]




IPE_B_13(3Q1O)
?
[Raw transfer]




IPE_A_4(4LLT)
?
[Raw transfer]




DST_D_11(3KRF)
?
[Raw transfer]




DST_D_6(3OAC)
?
[Raw transfer]




DST_B_9(1RQI)
ISPA_ECOLI
[Raw transfer]




IPE_B_9(4LLT)
?
[Raw transfer]




DST_D_11(3OAB)
?
[Raw transfer]




GST_A_4(4LLS)
?
[Raw transfer]




DST_A_10(1RQI)
ISPA_ECOLI
[Raw transfer]




GST_B_9(4LLS)
?
[Raw transfer]




DST_D_11(3KRO)
?
[Raw transfer]




GPP_D_9(3KRP)
?
[Raw transfer]




IPE_A_6(3PDE)
?
[Raw transfer]




GRG_A_3(2J1P)
GGPPS_SINAL
[Raw transfer]




GRG_A_3(2J1P)
GGPPS_SINAL
[Raw transfer]




IPE_D_7(3KRC)
?
[Raw transfer]




IPR_A_9(1RQJ)
ISPA_ECOLI
[Raw transfer]




IPR_B_11(1RQJ)
ISPA_ECOLI
[Raw transfer]




PPV_A_3(3NPK)
?
[Raw transfer]




PPV_A_3(3NPK)
?
[Raw transfer]




IPE_A_5(3KRC)
?
[Raw transfer]




DMS_B_13(3ZOU)
?
[Raw transfer]




POP_A_3(3OYR)
?
[Raw transfer]




6H6_A_4(3ZMB)
?
[Raw transfer]




22 PsiBlast_CBE 96.8791%-136 - C1 -3LLW - ? -
23 PsiBlast_CBE 96.2891%-131 - C1 -3LLW - ? -
21 PsiBlast_CBE 96.2191%-131 - C1 -3LLW - ? -
1 PsiBlast_PDB 95.5491%-132 - C1 -3LLW - ? -
72 HHSearch 95.2791%-133 - C1 -3LLW - ? -
2 PsiBlast_PDB 95.1992%-121 - C1 -3Q1O 4.1 ?
26 PsiBlast_CBE 94.7592%-119 - C1 -3Q1O 4.2 ?
25 PsiBlast_CBE 94.0292%-120 - C1 -3Q1O 3.9 ?
24 PsiBlast_CBE 93.8192%-117 - C1 -3Q1O 4.0 ?
75 HHSearch 70.4845%-112 - C1 -3NPK 3.5 ?
3 PsiBlast_PDB 68.7246%-104 - C1 -3NPK 3.5 ?
69 HHSearch 64.3536%-102 - C1 -3LSN - ? -
77 HHSearch 62.8936%-115 - C1 -2J1P 6.7 GGPPS_SINAL
11 PsiBlast_PDB 62.4639%-120 - C1 -3KRP - ? -
65 HHSearch 61.4634%-104 - C1 -3TS7 - ? -
70 HHSearch 61.3431%-110 - C1 -1RTR - ? -
32 PsiBlast_CBE 61.0339%-115 - C1 -3KRP 4.6 ?
47 PsiBlast_CBE 60.9734% -93 * C1 *3TS7 - ? -
12 PsiBlast_PDB 60.8839%-122 - C1 -3OAB - ? -
66 HHSearch 60.8735%-107 - C1 -3UCA - ? -
64 HHSearch 60.6434%-100 - C1 -3PDE 3.1 ?
71 HHSearch 60.5833% -91 - C1 -1RQJ 4.0 ISPA_ECOLI
6 PsiBlast_PDB 59.8835% -79 - C1 -4LLT 3.8 ?
35 PsiBlast_CBE 59.6239%-116 - C1 -3KRC 3.8 ?
8 PsiBlast_PDB 58.7439%-119 - C1 -3KRC 2.5 ?
39 PsiBlast_CBE 57.4838%-102 - C1 -3ZOU 3.6 ?
5 PsiBlast_PDB 57.1335% -75 - C1 -4LLS 5.8 ?
29 PsiBlast_CBE 56.2835% -77 - C1 -4LLS 5.3 ?
28 PsiBlast_CBE 55.5635% -78 - C1 -4LLT 3.4 ?
17 PsiBlast_PDB 55.3738%-104 - C1 -3ZMB 4.0 ?
34 PsiBlast_CBE 54.8539% -97 - C1 -3KRF 2.9 ?
31 PsiBlast_CBE 54.4139% -95 - C1 -3OAB 2.8 ?
33 PsiBlast_CBE 53.9139% -98 - C1 -3KRO 3.1 ?
30 PsiBlast_CBE 53.0139% -94 - C1 -3OAC 2.9 ?
20 PsiBlast_PDB 51.7636% -80 - C1 -1RQI 3.4 ISPA_ECOLI
19 PsiBlast_PDB 51.3136% -79 - C1 -1RQJ 4.9 ISPA_ECOLI
45 PsiBlast_CBE 51.1836% -77 - C1 -1RQI 3.2 ISPA_ECOLI
44 PsiBlast_CBE 50.4836% -78 - C1 -1RQJ 4.9 ISPA_ECOLI
14 PsiBlast_PDB 50.4840%-113 - C1 -2J1P 6.7 GGPPS_SINAL