@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0426: (2016-03-15 )
MEVKDILTKELVVFDLEATTKETAIEEMAEMLDERGILADKATYVQAVLEREAHSTTGIGNNIAIPHGKSESVTKSAIVFARTKEMIEWESLDDEPVNMIFLLAITDSDKTDGHLKILAEIATKLMDDDIVESLKNTRDKEEVIRILNGGVVEI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_6(3URR)
?
[Raw transfer]



BME_G_7(1A6J)
PTSN_ECOLI
[Raw transfer]
29 HHSearch 96.6232%-123 - C4 -2A0J - ? -
27 HHSearch 94.6830%-104 - C4 -3URR - ? -
1 PsiBlast_PDB 94.2433%-108 - C4 -2A0J - ? -
4 PsiBlast_PDB 94.1033%-116 - C4 -3URR - ? -
3 PsiBlast_PDB 94.0933%-108 - C4 -4GQX - ? -
22 PsiBlast_CBE 92.7833%-118 - C4 -3URR 3.5 ?
28 HHSearch 90.9531%-105 - C4 -1A3A - PTM3C_ECOLI -
2 PsiBlast_PDB 90.1431%-105 - C4 -1A6J - PTSN_ECOLI -
21 PsiBlast_CBE 89.8331%-109 - C4 -1A6J 2.7 PTSN_ECOLI
5 PsiBlast_PDB 89.7729%-116 - C4 -1A3A - PTM3C_ECOLI -
6 PsiBlast_PDB 88.7429%-121 - C4 -1J6T - -
7 PsiBlast_PDB 87.9228%-118 - C4 -2FEW - -
26 HHSearch 87.4529%-103 - C4 -1A6J - PTSN_ECOLI -
36 Fugue 84.9028%-104 * C4 *1A3A - PTM3C_ECOLI -
30 HHSearch 84.4924%-112 - C4 -3OXP - ? -
8 PsiBlast_PDB 81.1123%-103 - C4 -3OXP - ? -
37 Fugue 78.3623% -92 - C4 -1XIZ - ? -
9 PsiBlast_PDB 77.5226%-101 - C4 -1XIZ - ? -
34 HHSearch 76.6225%-104 - C4 -3T43 - ? -
11 PsiBlast_PDB 75.6825%-102 - C4 -4M8Q - ? -