@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0311: (2015-11-30 )
MDAKTKYKAKKIKAVFFDIDDTLRVKDTGYMPPSILKVFKALKDKGIVVGIASGRARYGVPKEVQDLNADYCVKLNGAYVKDKDKNIIFHRPIPAEYVEQYKKWADTVGIKYGLAGRHEAVLSDRDDLVNDAIDIVYSDLEVNPDFNKEHDIYQMWTFEDKGDSLHLPEPLDEHLRLIRWHDHSSDVVLKGTSKALGVSKVVEHLGLKPENILVFGDELNDLELFDYAGLAVAMGVSHPEAQKKADFITKKVEEDGILYALEELGLIEKELTFPQVDIENTEGPVAVIKTNHGDMTVKLFPDHAPKTVANFIGLAKQGYYDGIIFHRIIPDFMIQGGDPTGTGMGGESIYGESFEDEFSEELYNVRGALSMANAGPNTNGSQFFIVQNTKIPYAKKELERGGWPTPIAELYAGQGGTPHLDRRHSVFGQLVNQSSFEVLDEIAAVETGSQDKPLEDVVILTIEVKE

Atome Classification :

(63 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_D_4(2HQ6)
CWC27_HUMAN
[Raw transfer]



GOL_D_4(2HQ6)
CWC27_HUMAN
[Raw transfer]



PRO_A_3(2CFE)
?
[Raw transfer]



GOL_A_3(4R3E)
CWC27_HUMAN
[Raw transfer]



EOV_A_3(3EOV)
?
[Raw transfer]
-
PRO_B_3(1E8K)
CYP3_CAEEL
[Raw transfer]



PRO_A_3(2IGW)
CYP3_CAEEL
[Raw transfer]



EOV_B_4(3EOV)
?
[Raw transfer]
-
EDO_A_2(3S6M)
?
[Raw transfer]



SER_A_2(2IGV)
CYP3_CAEEL
[Raw transfer]



FMT_D_4(2POE)
?
[Raw transfer]



FMT_D_4(2POE)
?
[Raw transfer]



GOL_A_4(4R3E)
CWC27_HUMAN
[Raw transfer]



CHAIN_H_8(2RMC)
PPIC_MOUSE
[Raw transfer]
-
CHAIN_H_8(1C5F)
CYP1_BRUMA
[Raw transfer]
-
DTT_A_2(1H0P)
CYP5_CAEEL
[Raw transfer]



GLY_A_2(2IGW)
CYP3_CAEEL
[Raw transfer]



ALA_A_2(2CFE)
?
[Raw transfer]



ALA_B_3(2QER)
?
[Raw transfer]



CHAIN_U_5(2POY)
?
[Raw transfer]
-
CHAIN_N_14(1C5F)
CYP1_BRUMA
[Raw transfer]
-
CHAIN_L_10(2ESL)
PPIC_HUMAN
[Raw transfer]
-
CHAIN_M_11(2ESL)
PPIC_HUMAN
[Raw transfer]
-
CHAIN_F_6(1C5F)
CYP1_BRUMA
[Raw transfer]
-
CHAIN_D_4(1C5F)
CYP1_BRUMA
[Raw transfer]
-
CHAIN_L_12(1C5F)
CYP1_BRUMA
[Raw transfer]
-
CHAIN_E_5(1XQ7)
?
[Raw transfer]
-
CHAIN_D_4(1XQ7)
?
[Raw transfer]
-
CHAIN_J_10(1C5F)
CYP1_BRUMA
[Raw transfer]
-
3EP_A_3(1E3B)
CYP3_CAEEL
[Raw transfer]



CHAIN_V_6(2POY)
?
[Raw transfer]
-
CHAIN_C_3(2OJU)
PPIL3_HUMAN
[Raw transfer]
-
CHAIN_D_4(2OJU)
PPIL3_HUMAN
[Raw transfer]
-
CHAIN_F_6(1XQ7)
?
[Raw transfer]
-
CHAIN_P_16(1C5F)
CYP1_BRUMA
[Raw transfer]
-
CHAIN_B_2(1C5F)
CYP1_BRUMA
[Raw transfer]
-
CHAIN_T_4(2POY)
?
[Raw transfer]
-
CHAIN_F_6(2RMC)
PPIC_MOUSE
[Raw transfer]
-
CHAIN_B_2(2RMC)
PPIC_MOUSE
[Raw transfer]
-
CHAIN_D_4(2RMC)
PPIC_MOUSE
[Raw transfer]
-
CHAIN_C_2(1CYN)
PPIB_HUMAN
[Raw transfer]
-
CHAIN_M_11(2ESL)
PPIC_HUMAN
[Raw transfer]
-
CHAIN_B_2(4HY7)
?
[Raw transfer]
-
CHAIN_F_4(4JJM)
?
[Raw transfer]
-
CHAIN_C_2(1CYN)
PPIB_HUMAN
[Raw transfer]
-
CHAIN_L_10(2ESL)
PPIC_HUMAN
[Raw transfer]
-
CHAIN_E_5(3BO7)
?
[Raw transfer]
-
CHAIN_B_2(2WFJ)
PPIG_HUMAN
[Raw transfer]
-
CHAIN_N_12(2ESL)
PPIC_HUMAN
[Raw transfer]
-
CHAIN_K_9(2ESL)
PPIC_HUMAN
[Raw transfer]
-
CHAIN_E_3(4JJM)
?
[Raw transfer]
-
1 PsiBlast_PDB 79.1148% -79 - C1 -2A2N - PPWD1_HUMAN -
111 HHSearch 78.3755% -76 - C1 -2A2N - PPWD1_HUMAN -
21 PsiBlast_CBE 77.1448% -77 - C1 -2A2N - -
10 PsiBlast_PDB 75.5033% -79 - C2 -2QYH - ? -
109 HHSearch 75.2346% -62 - C1 -2POE 2.6 ?
110 HHSearch 74.5048% -69 - C1 -1ZKC - PPIL2_HUMAN -
107 HHSearch 73.7250% -73 - C1 -2B71 - ? -
22 PsiBlast_CBE 73.3542% -85 - C1 -2OJU 7.2 PPIL3_HUMAN
15 PsiBlast_PDB 73.1741% -81 - C1 -1W74 - PPIA_MYCTU -
113 HHSearch 73.0249% -69 - C1 -2OK3 - PPIL3_HUMAN -
6 PsiBlast_PDB 72.3743% -81 - C1 -1XYH - PPIL3_HUMAN -
7 PsiBlast_PDB 72.2143% -79 - C1 -2OK3 - PPIL3_HUMAN -
18 PsiBlast_PDB 71.7830% -74 - C2 -2RBK - ? -
17 PsiBlast_PDB 71.4330% -75 - C2 -2RB5 - ? -
16 PsiBlast_PDB 71.3630% -73 - C2 -1YMQ - ? -
5 PsiBlast_PDB 71.2042% -81 - C1 -2OJU 7.2 PPIL3_HUMAN
20 PsiBlast_PDB 70.9329% -72 - C2 -2RAR - ? -
105 HHSearch 70.4847% -80 - C1 -2FU0 - ? -
12 PsiBlast_PDB 69.0739% -69 - C1 -2QER 2.7 ?
11 PsiBlast_PDB 69.0539% -65 - C1 -2POE 2.6 ?
14 PsiBlast_PDB 69.0037% -75 - C1 -2HQ6 2.3 CWC27_HUMAN
13 PsiBlast_PDB 68.9137% -75 - C1 -4R3E 2.5 CWC27_HUMAN
108 HHSearch 67.3940% -60 - C1 -2HQ6 2.3 CWC27_HUMAN
126 Fugue 66.3443% -54 - C1 -1CYN 6.8 PPIB_HUMAN
118 HHSearch 64.1338% -75 - C1 -3BO7 5.3 ?
58 PsiBlast_CBE 63.6442% -82 - C1 -2ESL 8.7 PPIC_HUMAN
60 PsiBlast_CBE 63.4342% -78 - C1 -2ESL 8.2 PPIC_HUMAN
59 PsiBlast_CBE 63.3342% -76 - C1 -2ESL 8.3 PPIC_HUMAN
43 PsiBlast_CBE 63.2038% -62 - C1 -2WFJ 7.3 PPIG_HUMAN
42 PsiBlast_CBE 63.0842% -79 - C1 -2RMC 8.7 PPIC_MOUSE
62 PsiBlast_CBE 63.0142% -80 - C1 -2ESL 2.3 PPIC_HUMAN
41 PsiBlast_CBE 62.8942% -78 - C1 -2RMC 8.2 PPIC_MOUSE
39 PsiBlast_CBE 62.6142% -78 - C1 -2RMC 8.5 PPIC_MOUSE
30 PsiBlast_CBE 62.4841% -67 - C1 -1C5F 7.2 CYP1_BRUMA
61 PsiBlast_CBE 62.4642% -77 - C1 -2ESL 8.4 PPIC_HUMAN
36 PsiBlast_CBE 62.3241% -66 - C1 -1C5F 7.5 CYP1_BRUMA
63 PsiBlast_CBE 62.0742% -77 - C1 -2ESL 2.5 PPIC_HUMAN
34 PsiBlast_CBE 61.8341% -62 - C1 -1C5F 6.6 CYP1_BRUMA
29 PsiBlast_CBE 61.6241% -66 - C1 -1C5F 6.6 CYP1_BRUMA
32 PsiBlast_CBE 61.2441% -61 - C1 -1C5F 6.7 CYP1_BRUMA
45 PsiBlast_CBE 61.1942% -63 - C1 -1XQ7 5.1 ?
40 PsiBlast_CBE 61.1942% -76 - C1 -2RMC 8.2 PPIC_MOUSE
33 PsiBlast_CBE 61.1041% -62 - C1 -1C5F 7.2 CYP1_BRUMA
124 HHSearch 61.0039% -67 - C1 -3S6M 2.5 ?
53 PsiBlast_CBE 60.5539% -62 - C1 -2POY 7.3 ?
48 PsiBlast_CBE 60.5140% -66 - C1 -2CFE 3.4 ?
56 PsiBlast_CBE 60.3543% -62 - C1 -3EOV 5.1 ?
31 PsiBlast_CBE 60.2241% -62 - C1 -1C5F 7.5 CYP1_BRUMA
35 PsiBlast_CBE 60.1041% -60 - C1 -1C5F 7.0 CYP1_BRUMA
49 PsiBlast_CBE 59.8241% -63 - C1 -1CYN 7.4 PPIB_HUMAN
65 PsiBlast_CBE 59.5640% -72 - C1 -4HY7 8.4 ?
52 PsiBlast_CBE 59.4639% -62 - C1 -2POY 7.6 ?
50 PsiBlast_CBE 59.2842% -61 - C1 -1H0P 2.8 CYP5_CAEEL
51 PsiBlast_CBE 59.1639% -61 - C1 -2POY 7.0 ?
46 PsiBlast_CBE 59.0142% -57 - C1 -1XQ7 6.2 ?
57 PsiBlast_CBE 58.8043% -60 - C1 -3EOV 5.4 ?
44 PsiBlast_CBE 58.4842% -56 - C1 -1XQ7 6.9 ?
27 PsiBlast_CBE 56.5544% -49 - C1 -1E8K 3.4 CYP3_CAEEL
28 PsiBlast_CBE 56.1744% -50 - C1 -1E3B 2.5 CYP3_CAEEL
26 PsiBlast_CBE 55.4944% -48 - C1 -2IGV 4.5 CYP3_CAEEL
25 PsiBlast_CBE 54.7344% -49 - C1 -2IGW 3.3 CYP3_CAEEL
73 PsiBlast_CBE 52.1140% -57 - C1 -4JJM 8.0 ?
72 PsiBlast_CBE 51.9640% -50 - C1 -4JJM 7.5 ?