@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0501: (2015-12-01 )
MTKKALFTGSFDPVTNGHLDIIERASYLFDHVYIGLFYNLEKQGYFSIECRKKMLEEAIRQFKNVSVLVAQDRLAVDLAREVGAKYFVRGLRNSQDFDYEANLEFFNKQLADDIETVYLSTSPSLSPISSSRIRELIYFKASVKPFVPKSVVREVEKMSEE

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_B_6(4NAU)
COAD_STAAW
[Raw transfer]




AGS_A_7(4NAH)
COAD_STAAW
[Raw transfer]




AGS_C_12(4NAH)
COAD_STAAW
[Raw transfer]




APC_A_5(3NBA)
COAD_MYCTU
[Raw transfer]




AGS_B_10(4NAH)
COAD_STAAW
[Raw transfer]




AGS_F_16(4NAH)
COAD_STAAW
[Raw transfer]




AGS_D_13(4NAH)
COAD_STAAW
[Raw transfer]




APC_C_8(3NBA)
COAD_MYCTU
[Raw transfer]




AGS_C_7(4NAU)
COAD_STAAW
[Raw transfer]




AGS_E_15(4NAH)
COAD_STAAW
[Raw transfer]




ATP_B_6(1GN8)
COAD_ECOLI
[Raw transfer]




AGS_A_4(4NAU)
COAD_STAAW
[Raw transfer]




PPS_A_2(3F3M)
COAD_STAAW
[Raw transfer]




ADP_A_5(1O6B)
COAD_BACSU
[Raw transfer]




ADP_C_11(4NAT)
COAD_STAAW
[Raw transfer]




ADP_B_9(4NAT)
COAD_STAAW
[Raw transfer]




ADP_A_6(4NAT)
COAD_STAAW
[Raw transfer]




PNS_D_10(1VLH)
COAD_THEMA
[Raw transfer]




PNS_E_11(1VLH)
COAD_THEMA
[Raw transfer]




PNS_B_8(1VLH)
COAD_THEMA
[Raw transfer]




ACY_A_6(3NV7)
COAD_HELPY
[Raw transfer]




99 HHSearch 85.2841%-123 - C1 -3ND5 - COAD_ENTFA -
21 PsiBlast_CBE 83.4442%-136 - C1 -3ND7 - COAD_ENTFA -
47 PsiBlast_CBE 83.3841%-127 - C1 -1VLH 4.8 COAD_THEMA
22 PsiBlast_CBE 83.1242%-134 - C1 -3ND7 - COAD_ENTFA -
1 PsiBlast_PDB 82.7742%-133 - C1 -3ND5 - COAD_ENTFA -
2 PsiBlast_PDB 82.6442%-131 - C1 -3ND6 - COAD_ENTFA -
46 PsiBlast_CBE 82.3241%-128 - C1 -1VLH - COAD_THEMA -
28 PsiBlast_CBE 82.2142%-131 - C1 -3ND6 - COAD_ENTFA -
30 PsiBlast_CBE 82.0442%-138 - C1 -3ND6 - COAD_ENTFA -
29 PsiBlast_CBE 82.0342%-133 - C1 -3ND6 - COAD_ENTFA -
24 PsiBlast_CBE 81.9342%-129 - C1 -3ND7 - COAD_ENTFA -
26 PsiBlast_CBE 81.8942%-137 - C1 -3ND6 - COAD_ENTFA -
43 PsiBlast_CBE 81.5941%-125 - C1 -1VLH - COAD_THEMA -
27 PsiBlast_CBE 81.5542%-129 - C1 -3ND6 - COAD_ENTFA -
45 PsiBlast_CBE 81.5441%-127 - C1 -1VLH 5.2 COAD_THEMA
5 PsiBlast_PDB 81.2941%-133 - C1 -4NAH 6.0 COAD_STAAW
23 PsiBlast_CBE 80.9142%-133 - C1 -3ND7 - COAD_ENTFA -
25 PsiBlast_CBE 80.8242%-132 - C1 -3ND7 - COAD_ENTFA -
34 PsiBlast_CBE 80.7441%-126 - C1 -4NAT 4.5 COAD_STAAW
44 PsiBlast_CBE 80.7141%-128 - C1 -1VLH 5.3 COAD_THEMA
7 PsiBlast_PDB 80.2941%-128 - C1 -4NAU 6.1 COAD_STAAW
4 PsiBlast_PDB 80.2941%-129 - C1 -3F3M 5.4 COAD_STAAW
38 PsiBlast_CBE 79.9641%-126 - C1 -4NAH 6.2 COAD_STAAW
35 PsiBlast_CBE 79.8641%-131 - C1 -4NAH 6.1 COAD_STAAW
31 PsiBlast_CBE 79.7041%-128 - C1 -4NAU 6.9 COAD_STAAW
36 PsiBlast_CBE 79.0741%-126 - C1 -4NAH 6.7 COAD_STAAW
6 PsiBlast_PDB 78.9741%-129 - C1 -4NAT 4.2 COAD_STAAW
33 PsiBlast_CBE 78.6241%-133 - C1 -4NAT 4.4 COAD_STAAW
39 PsiBlast_CBE 78.0741%-126 - C1 -4NAH 6.8 COAD_STAAW
37 PsiBlast_CBE 76.8541%-129 - C1 -4NAH 5.3 COAD_STAAW
32 PsiBlast_CBE 75.5941%-130 - C1 -4NAU 7.1 COAD_STAAW
105 HHSearch 75.3337%-120 - C1 -1O6B 6.7 COAD_BACSU
20 PsiBlast_PDB 74.1337%-130 - C1 -3NBA 6.7 COAD_MYCTU
41 PsiBlast_CBE 73.8837%-116 - C1 -1GN8 6.4 COAD_ECOLI
58 PsiBlast_CBE 73.3737%-128 - C1 -3NBA 6.9 COAD_MYCTU
102 HHSearch 70.3839%-133 - C1 -3NV7 3.4 COAD_HELPY