@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1800: (2015-12-10 )
MKDRYILAVESSCDETSVAILKNDKELLANIIASQVESHKRFGGVVPEVASRHHVEVVTTCFEDALQEAGIVASDLDAVAVTYGPGLVGALLVGMAAAKAFAWANKLPLIPVNHMAGHLMAARDVKELQYPLLALLVSGGHTELVYVSGPGDYKIVGETRDDAVGEAYDKVGRVMGLTYPAGREIDQLAHKGQDTYHFPRAMIKEDHLEFSFSGLKSAFINLHHNAEQKGEALVLEDLCASFQAAVLDILLAKTQKALLKYPVKTLVVAGGVAANQGLRERLATDISPDIDVVIPPLRLCGDNAGMIALAAAIEFEKENFASLKLNAKPSLAFEGL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_14(4WQ5)
TSAD_ECOLI
[Raw transfer]




AGS_B_10(3ZEU)
?
[Raw transfer]




AGS_E_16(3ZEU)
?
[Raw transfer]




ATP_A_6(4WQ4)
TSAD_ECOLI
[Raw transfer]




ATP_A_7(4WQ5)
TSAD_ECOLI
[Raw transfer]




ATP_B_9(4WQ4)
TSAD_ECOLI
[Raw transfer]




ADP_A_5(4YDU)
TSAD_ECOLI
[Raw transfer]




ADP_B_12(4YDU)
TSAD_ECOLI
[Raw transfer]




AGS_B_10(3ZEU)
?
[Raw transfer]




AMP_B_4(3ZET)
?
[Raw transfer]




5 PsiBlast_PDB 97.8443%-117 - C2 -4WQ5 6.7 TSAD_ECOLI
22 PsiBlast_CBE 97.1243%-115 - C2 -4YDU 6.3 TSAD_ECOLI
24 PsiBlast_CBE 96.8543%-115 - C2 -4WQ5 7.0 TSAD_ECOLI
21 PsiBlast_CBE 96.3644%-116 - C2 -3ZEU 6.8 ?
3 PsiBlast_PDB 96.1643%-116 - C2 -4YDU 6.6 TSAD_ECOLI
31 HHSearch 96.1442%-115 - C2 -3ZEU 6.4 ?
2 PsiBlast_PDB 95.9044%-112 - C2 -3ZEU 7.5 ?
4 PsiBlast_PDB 95.8143%-117 - C2 -4WQ4 5.4 TSAD_ECOLI
1 PsiBlast_PDB 95.1044%-114 - C2 -3ZET 5.9 ?
23 PsiBlast_CBE 94.9843%-117 - C2 -4WQ4 6.0 TSAD_ECOLI
32 HHSearch 87.0230%-112 * C2 *3EN9 - KAE1B_METJA -
52 Fugue 86.5331%-113 - C2 -2IVN - KAE1_PYRAB -
9 PsiBlast_PDB 86.3931%-120 - C2 -3WUH - QRI7_YEAST -
33 HHSearch 86.1431%-111 - C2 -2IVN - KAE1_PYRAB -
10 PsiBlast_PDB 85.3831%-107 - C2 -2VWB - KAE1B_METJA -
29 PsiBlast_CBE 83.8431%-110 - C2 -2VWB - KAE1B_METJA -
26 PsiBlast_CBE 83.1833%-112 - C2 -2IVO - KAE1_PYRAB -
27 PsiBlast_CBE 83.0033%-112 - C2 -2IVO - KAE1_PYRAB -
30 PsiBlast_CBE 82.5431%-104 - C2 -3EN9 - KAE1B_METJA -
25 PsiBlast_CBE 82.2233%-112 - C2 -2IVO - KAE1_PYRAB -