@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2964: (2016-05-15 )
MGKGSMTAHATPNEPDYPPPPGGPPPPADIGRLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPGLTAAVDELQRDFGSTVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANHPDLAAHVRPFGVPFIHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDEGPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHHNQTIVF

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_F_6(1MEJ)

[Raw transfer]




GOL_E_5(1MEJ)
PUR2_HUMAN
[Raw transfer]




GAR_E_5(1MEN)
PUR2_HUMAN
[Raw transfer]




GAR_F_6(1MEN)

[Raw transfer]




NHS_E_5(1C2T)
PUR3_ECOLI
[Raw transfer]




NHR_C_3(1C3E)
PUR3_ECOLI
[Raw transfer]




NHR_E_5(1C3E)
PUR3_ECOLI
[Raw transfer]




NHS_C_3(1C2T)
PUR3_ECOLI
[Raw transfer]




KT5_C_3(1RC0)
PUR2_HUMAN
[Raw transfer]




DZF_D_12(1CDE)
PUR3_ECOLI
[Raw transfer]




DZF_A_6(1CDE)
PUR3_ECOLI
[Raw transfer]




DZF_B_8(1CDE)
PUR3_ECOLI
[Raw transfer]




DZF_C_10(1CDE)
PUR3_ECOLI
[Raw transfer]




DQB_C_3(1ZLY)

[Raw transfer]




3YG_A_3(4ZZ2)

[Raw transfer]




GAR_D_4(1MEN)
PUR2_HUMAN
[Raw transfer]




FLC_A_7(3NRB)
?
[Raw transfer]




EDO_A_6(3OBI)
?
[Raw transfer]




EDO_A_16(3LOU)
?
[Raw transfer]




105 HHSearch 97.4558%-146 - C4 -3W7B - ? -
1 PsiBlast_PDB 97.1958%-146 - C4 -3W7B - ? -
103 HHSearch 92.3345%-151 - C4 -3O1L - ? -
104 HHSearch 90.2743%-148 - C4 -3LOU 3.1 ?
4 PsiBlast_PDB 90.0144%-151 - C4 -3O1L - ? -
5 PsiBlast_PDB 89.9242%-154 - C4 -3LOU - ? -
2 PsiBlast_PDB 89.7246%-144 - C4 -3OBI - ? -
107 HHSearch 89.2246%-140 - C4 -3OBI 3.1 ?
3 PsiBlast_PDB 87.8246%-144 - C4 -3NRB - ? -
106 HHSearch 86.9846%-137 - C4 -3NRB 2.4 ?
9 PsiBlast_PDB 68.4132%-137 - C4 -3AUF - ? -
116 HHSearch 66.3028%-142 - C4 -3TQR - ? -
117 HHSearch 66.2228%-142 - C4 -1JKX - PUR3_ECOLI -
113 HHSearch 66.0630%-142 - C4 -3P9X - ? -
109 HHSearch 66.0532%-133 - C4 -2YWR - ? -
115 HHSearch 63.7930%-144 - C4 -3KCQ - ? -
8 PsiBlast_PDB 63.1833%-145 - C4 -3P9X - ? -
111 HHSearch 63.1629%-136 - C4 -4ZZ1 - -
112 HHSearch 63.1027%-153 - C4 -4S1N - ? -
7 PsiBlast_PDB 62.9433%-136 - C4 -2YWR - ? -
56 PsiBlast_CBE 57.8132%-137 - C4 -4ZZ2 6.7
40 PsiBlast_CBE 57.5532%-134 - C4 -1RC0 8.1 PUR2_HUMAN
36 PsiBlast_CBE 56.4532%-135 - C4 -1ZLY 5.6
13 PsiBlast_PDB 46.6636%-118 - C4 -1C2T 7.7 PUR3_ECOLI
29 PsiBlast_CBE 46.6436%-116 - C4 -1CDE 6.3 PUR3_ECOLI
27 PsiBlast_CBE 46.6336%-116 - C4 -1CDE 6.2 PUR3_ECOLI
28 PsiBlast_CBE 46.6136%-116 - C4 -1CDE 6.3 PUR3_ECOLI
15 PsiBlast_PDB 46.5936%-116 - C4 -1CDE 6.3 PUR3_ECOLI
19 PsiBlast_PDB 46.1436%-117 - C4 -1C3E 7.7 PUR3_ECOLI
31 PsiBlast_CBE 45.4136%-116 - C4 -1C2T 7.4 PUR3_ECOLI
32 PsiBlast_CBE 44.7336%-116 - C4 -1C3E 7.6 PUR3_ECOLI
59 PsiBlast_CBE 43.6341%-114 - C4 -1MEN Error PUR2_HUMAN
58 PsiBlast_CBE 43.0741%-112 - C4 -1MEN Error
63 PsiBlast_CBE 42.6341%-112 - C4 -1MEJ Error PUR2_HUMAN
61 PsiBlast_CBE 42.5341%-112 - C4 -1MEJ Error
60 PsiBlast_CBE 40.9441%-105 - C4 -1MEN 0.5 PUR2_HUMAN