@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1268: (2016-01-28 )
MQRIRIIDSHTGGEPTRLVIGGFPDLGQGDMAERRRLLGERHDAWRAACILEPRGSDVLVGALLCAPVDPEACAGVIFFNNSGYLGMCGHGTIGLVASLAHLGRIGPGVHRIETPVGEVEATLHEDGSVSVRNVPAYRYRRQVSVEVPGIGRVSGDIAWGGNWFFLVAGHGQRLAGDNLDALTAYTVAVQQALDDQDIRGEDGGAIDHIELFADDPHADSRNFVLCPGKAYDRSPCGTGTSAKLACLAADGKLLPGQPWRQASVIGSQFEGRYEWLDGQPGGPIVPTIRGRAHVSAEATLLLADDDPFAWGIRR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PYC_B_8(4J9W)
4HYPE_PSEF5
[Raw transfer]



PYC_A_4(4J9W)
4HYPE_PSEF5
[Raw transfer]



HYP_B_5(4J9X)
4HYPE_PSEF5
[Raw transfer]



HYP_A_3(4J9X)
4HYPE_PSEF5
[Raw transfer]



UNL_B_9(4JUU)
4HYPE_XANCP
[Raw transfer]



PYC_B_4(1W61)
PRCMA_TRYCC
[Raw transfer]



PYC_A_3(1W61)
PRCMA_TRYCC
[Raw transfer]



PYC_A_3(1W61)
PRCMA_TRYCC
[Raw transfer]



PYC_A_3(1W62)
PRCMA_TRYCC
[Raw transfer]



PYC_B_5(4Q60)
4HPE1_BURM1
[Raw transfer]



PYC_A_4(4Q60)
4HPE1_BURM1
[Raw transfer]
4 PsiBlast_PDB 93.0273%-109 - C3 -4Q60 4.0 4HPE1_BURM1
15 PsiBlast_CBE 92.5273%-113 - C3 -4Q60 3.4 4HPE1_BURM1
13 PsiBlast_CBE 92.4675%-105 - C3 -4J9X 4.6 4HYPE_PSEF5
14 PsiBlast_CBE 91.6475%-106 - C3 -4J9W 4.6 4HYPE_PSEF5
2 PsiBlast_PDB 91.6075%-105 - C3 -4J9W 4.5 4HYPE_PSEF5
3 PsiBlast_PDB 91.4975%-107 - C3 -4J9X 4.5 4HYPE_PSEF5
16 PsiBlast_CBE 89.5868%-105 - C3 -4JD7 - 4HYPE_PSEP1 -
17 PsiBlast_CBE 88.0858%-105 - C3 -4JUU 2.8 4HYPE_XANCP
1 PsiBlast_PDB 77.88100% -30 - C3 -2AZP - 4HYPE_PSEAE -
19 HHSearch 77.8636% -89 - C3 -1W61 4.1 PRCMA_TRYCC
5 PsiBlast_PDB 75.6733% -93 - C3 -1W61 4.1 PRCMA_TRYCC
6 PsiBlast_PDB 75.1733% -90 - C3 -1W62 4.3 PRCMA_TRYCC
18 PsiBlast_CBE 74.6733% -92 - C3 -1W61 4.3 PRCMA_TRYCC
7 PsiBlast_PDB 73.2429% -86 - C3 -4Q2H - 4HPE1_AGRRK -
8 PsiBlast_PDB 69.5428% -88 - C3 -4K7G - T3HPD_AGRVS -
22 HHSearch 53.4316% -58 - C3 -3EDN - ? -
26 HHSearch 52.9617% -63 - C3 -2GKE - DAPF_HAEIN -
25 HHSearch 52.6519% -68 * C3 *1XUB - PHZF_PSEFL -
20 HHSearch 52.4716% -67 - C3 -1YM5 - YHI9_YEAST -
42 Fugue 52.4414% -73 - C3 -1YM5 - YHI9_YEAST -