@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1430: (2016-01-29 )
MALVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWCAIGKTSWEISVICNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLGLITL

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TX3_C_7(3IX8)
LASR_PSEAE
[Raw transfer]



TX3_A_5(3IX8)
LASR_PSEAE
[Raw transfer]



TX3_B_6(3IX8)
LASR_PSEAE
[Raw transfer]



TY4_C_8(3JPU)
LASR_PSEAE
[Raw transfer]



TY4_A_6(3JPU)
LASR_PSEAE
[Raw transfer]



TX3_D_8(3IX8)
LASR_PSEAE
[Raw transfer]



TY4_B_7(3JPU)
LASR_PSEAE
[Raw transfer]



TY4_D_9(3JPU)
LASR_PSEAE
[Raw transfer]



TY4_E_10(3JPU)
LASR_PSEAE
[Raw transfer]



OHN_H_8(2UV0)
LASR_PSEAE
[Raw transfer]



OHN_B_4(3IX3)
LASR_PSEAE
[Raw transfer]



OHN_A_3(3IX3)
LASR_PSEAE
[Raw transfer]



OHN_G_7(2UV0)
LASR_PSEAE
[Raw transfer]



OHN_E_5(2UV0)
LASR_PSEAE
[Raw transfer]



OHN_F_6(2UV0)
LASR_PSEAE
[Raw transfer]



PG4_A_2(4LFU)
SDIA_ECOLI
[Raw transfer]
26 PsiBlast_CBE 96.35100%-123 - C1 -3IX8 11.0 LASR_PSEAE
3 PsiBlast_PDB 95.72100%-120 - C1 -3IX8 10.8 LASR_PSEAE
33 PsiBlast_CBE 95.04100%-117 - C1 -3IX4 - LASR_PSEAE -
25 PsiBlast_CBE 94.29100%-117 - C1 -3IX8 10.7 LASR_PSEAE
23 PsiBlast_CBE 94.24100%-121 - C1 -3JPU 10.9 LASR_PSEAE
34 PsiBlast_CBE 93.77100%-119 - C1 -3IX4 - LASR_PSEAE -
30 PsiBlast_CBE 93.77100%-120 - C1 -3IX4 - LASR_PSEAE -
29 PsiBlast_CBE 93.48100%-114 - C1 -3IX4 - LASR_PSEAE -
38 PsiBlast_CBE 93.07100%-119 - C1 -4NG2 - LASR_PSEAE -
39 PsiBlast_CBE 93.0097%-117 - C1 -2UV0 7.8 LASR_PSEAE
27 PsiBlast_CBE 92.98100%-116 - C1 -3IX8 10.8 LASR_PSEAE
31 PsiBlast_CBE 92.82100%-117 - C1 -3IX4 - LASR_PSEAE -
32 PsiBlast_CBE 92.75100%-115 - C1 -3IX4 - LASR_PSEAE -
28 PsiBlast_CBE 92.55100%-113 - C1 -3IX4 - LASR_PSEAE -
2 PsiBlast_PDB 92.50100%-114 - C1 -3IX4 - LASR_PSEAE -
5 PsiBlast_PDB 92.28100%-118 - C1 -4NG2 - LASR_PSEAE -
40 PsiBlast_CBE 91.9197%-116 - C1 -2UV0 7.9 LASR_PSEAE
36 PsiBlast_CBE 90.92100%-117 - C1 -4NG2 - LASR_PSEAE -
6 PsiBlast_PDB 90.4797%-113 - C1 -2UV0 7.9 LASR_PSEAE
35 PsiBlast_CBE 90.04100%-116 - C1 -3IX3 8.0 LASR_PSEAE
4 PsiBlast_PDB 89.33100%-114 - C1 -3JPU 10.5 LASR_PSEAE
22 PsiBlast_CBE 88.86100%-116 - C1 -3JPU 9.7 LASR_PSEAE
21 PsiBlast_CBE 88.79100%-112 - C1 -3JPU 11.2 LASR_PSEAE
24 PsiBlast_CBE 88.69100%-114 - C1 -3JPU 10.2 LASR_PSEAE
41 PsiBlast_CBE 88.5597%-112 - C1 -2UV0 7.9 LASR_PSEAE
1 PsiBlast_PDB 88.43100%-113 - C1 -3IX3 7.8 LASR_PSEAE
10 PsiBlast_PDB 49.4130% -98 - C1 -4LFU 2.7 SDIA_ECOLI