@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1796: (2016-02-01 )
MTAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGRLAQRMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQADGRLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLHD

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

L34_A_6(4B4V)
?
[Raw transfer]




L34_B_9(4B4V)
?
[Raw transfer]




9L9_A_6(4B4W)
?
[Raw transfer]




9L9_A_5(4CJX)
?
[Raw transfer]




9L9_B_9(4B4W)
?
[Raw transfer]




L34_E_5(1DIB)
C1TC_HUMAN
[Raw transfer]




9L9_B_7(4CJX)
?
[Raw transfer]




L37_A_6(1DIG)
C1TC_HUMAN
[Raw transfer]




NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]




L24_A_5(1DIA)
C1TC_HUMAN
[Raw transfer]




NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]




NAP_D_4(1DIB)
C1TC_HUMAN
[Raw transfer]




NAP_A_3(1DIA)
C1TC_HUMAN
[Raw transfer]




NAP_A_4(1DIG)
C1TC_HUMAN
[Raw transfer]




NAP_A_3(3NGL)
FOLD_THEAC
[Raw transfer]




NDP_D_4(1A4I)
C1TC_HUMAN
[Raw transfer]




NAP_C_3(1DIB)
C1TC_HUMAN
[Raw transfer]




NAP_C_4(3NGL)
FOLD_THEAC
[Raw transfer]




NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]




NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]




NAP_B_4(1DIA)
C1TC_HUMAN
[Raw transfer]




EDO_B_14(4B4U)
?
[Raw transfer]




NAP_B_5(1DIG)
C1TC_HUMAN
[Raw transfer]




EDO_A_7(4B4U)
?
[Raw transfer]




IMD_B_7(3L07)
FOLD_FRATT
[Raw transfer]




IMD_A_4(3L07)
FOLD_FRATT
[Raw transfer]




1 PsiBlast_PDB 93.45100%-114 - C7 -4A5O - FOLD_PSEAE -
67 HHSearch 87.3867%-118 - C7 -1B0A - FOLD_ECOLI -
2 PsiBlast_PDB 86.6567%-116 - C7 -1B0A - FOLD_ECOLI -
83 Fugue 86.3366%-116 - C7 -1B0A - FOLD_ECOLI -
21 PsiBlast_CBE 81.3550%-119 - C7 -3L07 3.7 FOLD_FRATT
66 HHSearch 81.1550%-117 - C7 -3L07 3.8 FOLD_FRATT
22 PsiBlast_CBE 81.1350%-121 - C7 -4A26 - ? -
4 PsiBlast_PDB 81.0350%-118 - C7 -3P2O 8.3 FOLD_CAMJE
64 HHSearch 80.9850%-116 * C7 *3P2O 8.3 FOLD_CAMJE
3 PsiBlast_PDB 80.8250%-118 - C7 -3L07 - FOLD_FRATT -
5 PsiBlast_PDB 80.7750%-119 - C7 -4A26 - ? -
6 PsiBlast_PDB 79.4246%-118 - C7 -4CJX 6.8 ?
14 PsiBlast_PDB 79.2642%-118 - C7 -4B4V 5.9 ?
23 PsiBlast_CBE 79.1946%-118 - C7 -4CJX 6.6 ?
30 PsiBlast_CBE 79.0042%-116 - C7 -4B4U 3.0 ?
13 PsiBlast_PDB 78.6142%-115 - C7 -4B4U 2.7 ?
29 PsiBlast_CBE 78.4842%-115 - C7 -4B4V 5.6 ?
15 PsiBlast_PDB 77.8642%-113 - C7 -4B4W 5.5 ?
10 PsiBlast_PDB 77.5443%-118 - C7 -1A4I 8.5 C1TC_HUMAN
28 PsiBlast_CBE 77.4942%-114 - C7 -4B4W 5.1 ?
25 PsiBlast_CBE 77.3043%-122 - C7 -1DIB 7.3 C1TC_HUMAN
65 HHSearch 77.2444%-112 - C7 -1A4I 8.5 C1TC_HUMAN
7 PsiBlast_PDB 77.1243%-121 - C7 -1DIA 6.7 C1TC_HUMAN
27 PsiBlast_CBE 76.6143%-117 - C7 -1A4I 7.6 C1TC_HUMAN
9 PsiBlast_PDB 76.3943%-121 - C7 -1DIG 7.9 C1TC_HUMAN
26 PsiBlast_CBE 76.0343%-118 - C7 -1DIA 7.5 C1TC_HUMAN
8 PsiBlast_PDB 75.9043%-117 - C7 -1DIB 7.2 C1TC_HUMAN
24 PsiBlast_CBE 75.6543%-120 - C7 -1DIG 7.4 C1TC_HUMAN
16 PsiBlast_PDB 70.4736%-118 - C7 -3NGL 7.9 FOLD_THEAC
31 PsiBlast_CBE 69.2836%-117 - C7 -3NGL 8.3 FOLD_THEAC