@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3306: (2016-02-15 )
MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPILRIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRKGQTRIAHSLELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AKG_A_5(3BUC)
ALKB2_HUMAN
[Raw transfer]




AKG_A_5(3S57)
ALKB2_HUMAN
[Raw transfer]




AKG_A_5(3S57)
ALKB2_HUMAN
[Raw transfer]




AKG_A_5(3S5A)
ALKB2_HUMAN
[Raw transfer]




AKG_A_5(3BU0)
ALKB2_HUMAN
[Raw transfer]




AKG_A_5(3RZJ)
ALKB2_HUMAN
[Raw transfer]




AKG_A_5(3RZK)
ALKB2_HUMAN
[Raw transfer]




SCC_B_5(3H8O)
ALKB2_HUMAN
[Raw transfer]




SCC_B_4(3H8X)
ALKB2_HUMAN
[Raw transfer]




53 HHSearch 96.0536% -73 - C4 -3S57 3.9 ALKB2_HUMAN
76 Fugue 93.9334% -70 - C4 -3BTX - ALKB2_HUMAN -
17 PsiBlast_PDB 92.5339% -67 - C4 -3RZG - ALKB2_HUMAN -
6 PsiBlast_PDB 91.6940% -66 - C4 -3S57 3.9 ALKB2_HUMAN
8 PsiBlast_PDB 91.2240% -65 - C4 -3BTZ - ALKB2_HUMAN -
11 PsiBlast_PDB 91.1140% -64 - C4 -3H8R - ALKB2_HUMAN -
1 PsiBlast_PDB 90.5240% -65 - C4 -3BTX - ALKB2_HUMAN -
7 PsiBlast_PDB 90.1640% -68 - C4 -3S5A 4.0 ALKB2_HUMAN
9 PsiBlast_PDB 89.8740% -69 - C4 -3RZM - ALKB2_HUMAN -
10 PsiBlast_PDB 89.7940% -65 - C4 -3H8O 3.2 ALKB2_HUMAN
12 PsiBlast_PDB 89.3240% -66 - C4 -3H8X 2.7 ALKB2_HUMAN
2 PsiBlast_PDB 89.3040% -61 - C4 -3BU0 3.6 ALKB2_HUMAN
3 PsiBlast_PDB 89.0240% -67 - C4 -3RZL - ALKB2_HUMAN -
5 PsiBlast_PDB 88.3740% -67 - C4 -3BUC 3.3 ALKB2_HUMAN
21 PsiBlast_CBE 88.3540% -64 - C4 -3RZL - ALKB2_HUMAN -
4 PsiBlast_PDB 88.0140% -68 - C4 -3BTY - ALKB2_HUMAN -
15 PsiBlast_PDB 87.9640% -68 - C4 -3RZK 3.4 ALKB2_HUMAN
13 PsiBlast_PDB 87.8140% -68 - C4 -3RZH - ALKB2_HUMAN -
14 PsiBlast_PDB 87.1940% -63 - C4 -3RZJ 4.4 ALKB2_HUMAN
18 PsiBlast_PDB 86.4639% -68 - C4 -4MGT - ALKB2_HUMAN -