@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4089: (2016-02-23 )
MRRLENRVALVTGAGQGIGRAIAECFAAEGARVLLATRTASRGQAVLEAIRLGGGTAELLAVDLSEYDAARRAVSATLERFGQLDILLHNAAAFPQCALAELDEGTLERTLAVNLKSCFRLTQAALPALRRSVAGRVLVTSSVTGPRTAIPGLSHYAASKAGVNGFIRAAALELAGDGITVNGVEPGLVATPALGSLGDAAALAAHIPLGRVGQPLDIAHAMLFLASDEASYITGQTLVVDGGALLPENGGLA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_C_18(3PK0)
?
[Raw transfer]



GOL_B_14(3PK0)
?
[Raw transfer]



PEG_A_5(3PK0)
?
[Raw transfer]



PG5_D_(3RIH)
?
[Raw transfer]



GOL_D_22(3PK0)
?
[Raw transfer]



PG5_C_21(3RIH)
?
[Raw transfer]



EDO_B_18(3RIH)
?
[Raw transfer]



EDO_C_26(3RIH)
?
[Raw transfer]



PG5_B_14(3RIH)
?
[Raw transfer]



PG5_A_6(3RIH)
?
[Raw transfer]



EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]
25 PsiBlast_CBE 84.2643% -94 - C1 -3PK0 3.4 ?
26 PsiBlast_CBE 83.3443% -94 - C1 -3PK0 3.5 ?
24 PsiBlast_CBE 82.0543% -95 - C1 -3PK0 3.4 ?
2 PsiBlast_PDB 81.0543% -95 - C1 -3PK0 2.6 ?
22 PsiBlast_CBE 80.5644% -98 - C1 -3RIH 3.0 ?
21 PsiBlast_CBE 80.1344% -98 - C1 -3RIH 1.8 ?
23 PsiBlast_CBE 79.9244%-100 - C1 -3RIH 3.2 ?
1 PsiBlast_PDB 78.2144%-102 - C1 -3RIH 1.9 ?
131 HHSearch 77.5238%-104 - C1 -3UF0 - ? -
27 PsiBlast_CBE 76.6039%-102 - C1 -4NBU - ? -
28 PsiBlast_CBE 76.3039%-103 - C1 -4NBU - ? -
29 PsiBlast_CBE 76.2239%-103 - C1 -4NBU - ? -
125 HHSearch 75.8933%-109 - C1 -1GEE - DHG_BACME -
92 PsiBlast_CBE 74.9037%-102 - C1 -4BMS - ? -
90 PsiBlast_CBE 74.7737%-103 - C1 -4BMS - ? -
19 PsiBlast_PDB 74.7238%-101 - C1 -3FTP - ? -
33 PsiBlast_CBE 74.7139%-113 - C1 -4WK6 - ? -
40 PsiBlast_CBE 74.6737%-106 - C1 -3SJ7 - ? -
91 PsiBlast_CBE 74.5737%-104 - C1 -4BMS - ? -
10 PsiBlast_PDB 74.3439%-105 - C1 -3U09 - FABG_VIBCH -
38 PsiBlast_CBE 73.0439%-105 - C1 -3RRO 2.6 FABG_VIBCH
8 PsiBlast_PDB 70.6639%-105 - C1 -3RRO 2.6 FABG_VIBCH