@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5162: (2016-03-05 )
MNRILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPLSVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGAPTSAELIADVTAQALQRLCWDVELAARASGTYHLVASGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQELSEQGPL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_A_4(1VL0)
?
[Raw transfer]



NAI_C_7(1VL0)
?
[Raw transfer]



NAI_B_6(1VL0)
?
[Raw transfer]



NDP_A_3(1KC3)
RMLD_SALTY
[Raw transfer]



NAD_A_3(1N2S)
RMLD_SALTY
[Raw transfer]



NAD_A_3(1N2S)
RMLD_SALTY
[Raw transfer]



NAI_A_4(1VL0)
?
[Raw transfer]



NDP_A_4(1KC1)
RMLD_SALTY
[Raw transfer]



NAD_A_3(1N2S)
RMLD_SALTY
[Raw transfer]
64 Fugue 95.9051% -92 - C1 -1N2S 11.1 RMLD_SALTY
4 PsiBlast_PDB 95.8252% -93 - C1 -1N2S 11.1 RMLD_SALTY
1 PsiBlast_PDB 95.6252% -94 - C1 -1KBZ - RMLD_SALTY -
3 PsiBlast_PDB 95.5652% -91 - C1 -1KC3 10.3 RMLD_SALTY
2 PsiBlast_PDB 95.0852% -95 - C1 -1KC1 10.4 RMLD_SALTY
52 HHSearch 90.6849% -90 - C1 -1N2S 10.8 RMLD_SALTY
44 HHSearch 82.9837% -79 - C1 -1VL0 10.7 ?
5 PsiBlast_PDB 82.5736% -80 - C1 -1VL0 11.0 ?
21 PsiBlast_CBE 82.4436% -79 - C1 -1VL0 11.5 ?
22 PsiBlast_CBE 82.1336% -80 - C1 -1VL0 11.1 ?
24 PsiBlast_CBE 81.9834% -89 - C1 -3SC6 - ? -
6 PsiBlast_PDB 80.5134% -83 - C1 -3SC6 - ? -
27 PsiBlast_CBE 80.0734% -89 - C1 -3SC6 - ? -
43 HHSearch 79.8534% -77 - C1 -3SC6 - ? -
26 PsiBlast_CBE 79.4534% -85 - C1 -3SC6 - ? -
23 PsiBlast_CBE 79.4434% -84 - C1 -3SC6 - ? -
25 PsiBlast_CBE 78.7234% -83 - C1 -3SC6 - ? -
65 Fugue 70.0829% -74 - C1 -2GGS - ? -
61 HHSearch 70.0418% -76 - C1 -2Q1W - ? -
54 HHSearch 69.9519% -82 - C1 -1OC2 - ? -