@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : CH1858_118030T0_kcl84: (2019-03-29 )
KRCDVGIYNSDGTGPRAYKNIDIPASCSQWDFDFEYGGVTYTVRLHYEGCRTEIIGRPQLPSHLIIRG
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....-.....10-------..--.......20.-----......---.-------30-----------.--.----...-------------.----...40-----...--....-.---50-----..------.....--.-60......-.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRC
D
-
V
G
I
YNS--------DG--TGP
R
A
YKNID-----IPASCS---Q-------W------------D--
F
----
D
F
E
-------------Y----G
G
V
T
Y
-----
T
V
R
--
L
H
YE-G---C
R
-----
T
E------IIGRP--Q-LP
S
H
L
I
IR-G
17
HHSearch
79.99
27%
0
- C- -
-
5VZU
-
FBX31_HUMAN
B:
[225-348]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
T
S
--------
Q
Y
--
D
N
C
L
T
Y
R
R
I
Y
-----
L
P
P
S
R
P
DDL
I
KPGL---
F
------------
K
--
G
----
T
Y
G
-------------
S
----
H
G
L
E
I
------
V
M
--
L
S
F
H
-
G
RRA
R
G
-----
T
K
------
I
T
G
D
P
--
N
-
I
P
A
G
------
35
Fugue
62.40
12%
11
- C7 -
-
1H54
-
?
A:
[1-753]
MKRIFEVQPWNVITHTFDPKDKRLQESMTSLGNGYMGMRGDFEEGYSGDSLQGIYLGGVWYPDKTRVGWWKNGYPKYFGKVVNAVNFIKLPIEINGEPVDLAKDKISDFTLDLDMHQGVLNRSFVVERGAVRVALNFQRFLSVAQPELSVQKVTVKNLSDAEVDVTLKPSIDADVMNEEANYDRFWDVLATDQQADRGSIVAKTTPNPFGTPRFTSGMEMRLVTDLKNVAITQPNEKEVTTAYTGKLAPQASAELEKRVIVVTSRDYDTQESLTAAMHQLSDKVAQSSYEDLLNAHTAIWAQRWEKSDVVIKGDDESQQGIRFNLFQLFSTYYGEDARLNIGPKGFTGEKYGGATYWDTEAFAFPVYLGITDPKVTRNLLMYRYKQLDGAYINAQEQGLKGALFPMVTFDGIECHNEWEITFEEIHRNGDIAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADEYENNVDNNWDTNMLAQWTLKYTLEILGKVDQDTAKQLDVSDEEKTKWQDIVDRMYLPYDKDLNIFVQHDGFLDKDIEPVSSIPADQRPINQNWSWDKILRSPYIKQGDVLQGIWDFIDDYTPEQKKANFDFYEPLTVHESSLSPAIHSVLAADLHYEDKAVELYSRTARLDLDNYNNDTTDGLHITSMTGAW
I
A
V
V
-
Q
G
F
A
G
M
--------
R
V
--
R
D
G
Q
L
H
Y
A
P
F
-----
L
P
K
T
W
T
---
S
-------
Y
------------
T
--
F
----
R
Q
V
-------------
F
----
R
D
R
L
I
-----
E
V
S
--
V
H
A
D
-
G
---
P
H
-----
F
K
------
L
L
S
G
E
-----
P
L
T
I
D
V
A
-
G
36
Fugue
62.04
34%
-57
- C7 -
-
2EM0
-
A:
[1-46]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
S
G
S
--------
S
G
--
M
G
E
K
T
W
K
------------
C
R
---
E
-------
C
------------
D
--
M
----
C
F
S
--------------------
Q
A
S
-----
S
L
R
--
L
H
Q
N
-
V
---
H
V
-----
G
E
---------
K
P
--
S
-
G
P
S
----
S
-
G
2
PsiBlast_PDB
60.35
30%
-95
- C9 -
-
1CUO
-
AZUR2_METJ
A:
[3-37]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
E
-
T
T
V
T
S
G
--------
D
---
T
M
T
Y
S
T
R
S
I
S
-----
V
P
A
S
C
A
---
E
-------
F
------------
T
--
V
----
N
F
E
-------------
H
----
K
G
--------------------------------------------------------
3
PsiBlast_PDB
59.34
30%
-89
- C9 -
-
1UAT
-
AZUR2_METJ
A:
[3-37]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
E
-
T
T
V
T
S
G
--------
D
---
T
M
T
Y
S
T
R
S
I
S
-----
V
P
A
S
C
A
---
E
-------
F
------------
T
--
V
----
N
F
E
-------------
H
----
K
G
--------------------------------------------------------
57
SP3
58.93
17%
-25
- C8 -
0.40
1H8L
1
CBPD_LOPSP
A:
[302-380]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
I
-
W
G
F
V
L
D
--------
A
T
--
D
G
-
R
G
I
L
N
A
T
-----
I
S
V
A
D
I
---
N
-------
H
------------
P
--
V
TTYK
D
G
D
-------------
Y
WRLL
V
Q
G
T
Y
-----
K
V
T
--
A
S
A
R
-
G
---
Y
D
PVTKT
V
E
------
V
D
S
K
G
--
G
-
V
Q
V
N
F
T
L
S
-
R
56
SP3
58.78
16%
63
- C8 -
0.31
1QR4
-
TENA_CHICK
A:
[1-87]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNPKDLEVSDPTETTLSLRWRRPVAKF
D
R
Y
R
-
L
T
Y
V
S
P
--------
S
G
--
K
----
K
N
E
M
E
-----
I
P
V
D
S
T
---
S
-------
F
------------
I
--
L
----
R
G
L
-------------
D
----
A
G
T
E
Y
-----
T
I
S
--
L
V
A
E
K
G
--------------------
R
H
K
--
S
-
K
P
T
T
I
K
G
S
-
T
40
Fugue
53.24
25%
-
- C7 -
-
4LL1
-
TXNIP_HUMAN
A:
[7-298]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKSFEVVFNDPEKVYGSGEKVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQGSQQCKQTSEYL
R
Y
E
D
-
T
L
L
L
E
D
--------
Q
P
--
T
G
E
N
E
M
V
I
M
R
------
P
G
N
K
Y
---
E
-------
Y
------------
K
--
F
----
G
F
E
LPQGPLGTSFKGK
Y
----
G
S
V
D
Y
-----
W
V
K
--
A
F
L
D
-----------------------
R
P
--
S
-
Q
P
T
Q
E
T
K
K
-
N
49
SP3
51.63
16%
-18
- C8 -
0.30
1PC0
-
RNP1_ARCFU
A:
[17-77]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
L
M
-
V
E
V
V
E
S
--------
P
N
--
H
S
E
V
G
I
K
G
E
V
-----
V
D
E
T
Q
N
---
T
-------
L
------------
K
--
I
----
M
T
E
-------------
K
----
G
L
K
V
V
AKRGR
T
F
R
--
V
W
Y
K
-
G
---
K
I
-----
M
R
------
I
K
G
D
---------------
51
SP3
51.59
16%
89
- C- -
-
1TEN
-
?
?:
[803-891]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDAPSQIEVKDVTDTTALITWFKPLAEI
D
G
I
E
-
L
T
Y
G
I
K
--------
D
V
--
P
G
D
R
--
T
T
I
D
-----
L
T
E
D
E
N
---
Q
-------
Y
------------
S
--
I
----
G
N
L
-------------
K
----
P
D
T
E
Y
-----
E
V
S
--
L
I
S
R
-
R
--------------------
G
D
M
--
S
S
N
P
A
K
E
T
F
T
-
T
44
Fugue
51.36
21%
-33
* C11 *
-
4GEK
1
CMOA_ECOLI
A:
[32-261]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WTFDERVAEVFPDMI
Q
R
S
V
-
P
G
Y
S
N
I
--------
I
S
--
M
I
G
M
L
A
E
R
F
V
-----
Q
P
G
T
-
Q
---
V
-------
Y
------------
D
--
L
----
G
C
S
-------------
L
----
G
A
A
T
L
-----
S
V
R
RN
I
H
H
D
-
N
---
C
K
-----
I
I
------
A
I
D
N
S
------
P
A
M
I
E
R
-
C
41
Fugue
50.80
20%
3
- C8 -
0.05
5HK3
-
MAZF6_MYCTU
A:
[2-114]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VISRAEIYWADLGPPSGSQPAKRRPVLVIQSDPYNASRL
A
T
V
I
-
A
A
V
I
T
S
--------
N
D
--
A
L
A
A
M
P
G
N
V
D
-----
L
P
A
T
T
T
---
R
-------
L
------------
P
--
R
----
D
S
V
-------------
V
----
N
-
V
T
A
-----
I
V
T
--
L
N
K
T
-
D
---
L
T
-----
D
R
------
V
G
E
V
P
--
A
-
S
L
M
H
E
V
D
R
-
G
52
SP3
50.49
13%
-42
- C4 -
-
1EP3
1
PYRK_LACLM
B:
[2-102]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQLQEMMTVVSQ
R
E
V
A
-
Y
N
I
F
E
M
VLKGTLVD
E
M
--
D
L
P
G
Q
F
L
H
L
A
-----
V
P
N
G
A
M
---
L
LRRPISI
S
------------
S
--
W
----
D
K
R
-------------
A
----
K
T
C
T
I
-----
L
Y
R
--
I
G
D
E
-
T
---
T
G
-----
T
Y
------
K
L
S
K
L
--
E
-
S
G
A
K
V
D
V
M
-
G
34
Fugue
50.40
20%
-104
* C6 *
-
5IVA
-
?
B:
[3-154]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
T
S
G
-
F
Q
L
-
R
G
--------
L
G
--
D
A
Q
F
A
L
K
E
I
D
-----
V
S
A
R
-----------------------------------
N
A
-------------
Y
----
G
P
T
V
R
-----
E
L
K
--
E
T
L
E
-
N
---
S
G
-----
V
K
------
V
T
--
S
--
N
-
A
P
Y
H
L
V
L
V
-
R
55
SP3
48.20
11%
14
- C8 -
-
1FNF
-
?
?:
[1236-1326]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPPPTDLRFTNIGPDTMRVTWAPPPS
I
D
L
T
N
F
L
V
R
Y
S
--------
P
V
--
K
N
E
E
D
V
A
E
L
S
-----
I
S
P
S
D
N
---
A
-------
V
------------
V
--
L
----
T
N
L
-------------
L
----
P
G
T
E
Y
-----
V
V
S
--
V
S
S
V
-
Y
--------------------
E
Q
H
--
E
S
T
P
L
R
G
R
Q
K
T
G
53
SP3
48.18
11%
-11
* C8 *
0.30
1FNH
-
A:
[93-182]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVSPPRRARVTDATETTITISWRTKTETI
T
G
F
Q
-
V
D
A
V
P
A
--------
N
G
--
Q
T
P
---
I
Q
R
T
-----
I
K
P
D
V
R
---
S
-------
Y
------------
T
--
I
----
T
G
L
-------------
Q
----
P
G
T
D
Y
-----
K
I
Y
--
L
Y
T
L
-
N
-------------------
D
N
A
R
--
S
-
S
P
V
V
I
D
A
S
-
T
46
Fugue
48.10
16%
-50
- C11 -
-
4IWN
3
CMOA_ECOLI
A:
[1-229]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TFDERVAEVFPDMI
Q
R
S
V
-
P
G
Y
S
N
I
--------
I
S
--
M
I
G
M
L
A
E
R
F
------
V
Q
P
G
T
Q
---
V
-------
Y
------------
D
--
L
----
G
C
S
-------------
L
----
G
A
A
T
L
-----
S
V
R
RN
I
H
H
D
-
N
---
C
K
-----
I
I
------
A
I
D
N
S
--
P
-
A
M
I
E
R
C
R
H
-
H
42
Fugue
46.12
20%
7
- C7 -
-
5TGQ
1
?
A:
[1-226]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNFKKYEENLVASIEEVIQRIIDDKHRPNIIGKTRVGAEVSDYLEDEFVKYIS
S
G
K
S
-
S
S
L
Y
D
A
--------
Q
G
--
A
P
K
E
K
T
K
N
----------------
P
-------
W
------------
D
AR
C
----
K
F
K
-------------
F
----
M
D
R
E
E
-----
E
I
W
--
I
D
F
K
-
A
---
F
K
-----
I
T
NMDSNP
D
I
G
T
P
--
N
-
K
I
V
K
F
I
H
E
-
G
4
PsiBlast_PDB
43.19
36%
-167
- C5 -
-
3PDC
-
HYES_HUMAN
A:
[22-48]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
P
-----
L
P
T
S
C
N
---
P
-------
S
------------
D
--
M
----
S
H
G
-------------
Y
----
V
T
V
K
P
-----
R
V
R
--
L
H
F
----------------------------------------
33
Fugue
41.06
17%
53
- C8 -
0.12
1SE9
-
MUB1_ARATH
A:
[1-101]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAEVH
N
Q
L
E
-
I
K
F
R
L
T
--------
D
G
SD
I
G
P
K
A
F
P
D
A
T
TVSAL
K
E
T
V
I
S
---
E
-------
W
PREKENGPKTVK
E
--
V
----
K
L
I
-------------
S
----
A
G
K
V
L
-----
E
N
S
--
K
T
V
K
-
D
---
Y
R
-----
S
P
------
V
S
N
L
A
GA
V
-
T
T
M
H
V
I
I
Q
-
A