@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XYF8: (2018-01-09 )
MIIKSERISLKHLLTVEALTDQEVMGLIRRGQEFKQGANWTPQKRQYFATNLFFENSTRTHKSFDVAEKKLGLEVIEFEASTSSVQKGETLYDTVLTMSALGVDVAVIRHGDENYYDELIQSKTIQCSIINGGDGSGQHPTQCLLDLMTIYEEFGHFEGLKVAIVGDITHSRVAKSNMQMLKRLGAQVFFSGPREWYDDEFEVYGHYMPLDELLDQVDVMMMLRVQHERHDGKESFSKEGYHQEHGLTVERAKKLQKHAIIMHPAPVNRDVELADSLVEGLQSRIVQQMSNGVFVRMAILEAVLNGKA

Atome Classification :

(76 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PAL_B_5(4BJH)
PYRB_AQUAE
[Raw transfer]




6PR_A_8(2H3E)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KGV)
?
[Raw transfer]




PAL_A_7(1D09)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KGX)
?
[Raw transfer]




PAL_C_8(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_A_8(1TTH)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(4KGV)
?
[Raw transfer]




PAL_C_8(4KGX)
?
[Raw transfer]




PAL_A_5(4KH1)
?
[Raw transfer]




6PR_C_7(2H3E)
PYRB_ECOLI
[Raw transfer]




PAL_C_10(4KH0)
?
[Raw transfer]




PAL_A_5(4F04)
PYRB_ECOLI
[Raw transfer]




PAL_B_7(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(4F04)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(8ATC)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KH0)
?
[Raw transfer]




PAL_C_8(1XJW)
PYRB_ECOLI
[Raw transfer]




PAL_C_11(4KH1)
?
[Raw transfer]




PAL_A_7(1XJW)
PYRB_ECOLI
[Raw transfer]




PAL_A_6(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_D_4(1ML4)
PYRB_PYRAB
[Raw transfer]




PAL_C_7(1TTH)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(1F1B)
PYRB_ECOLI
[Raw transfer]




PAL_A_7(8ATC)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(1D09)
PYRB_ECOLI
[Raw transfer]




1IP_A_7(2IPO)
PYRB_ECOLI
[Raw transfer]




1IP_C_9(2IPO)
PYRB_ECOLI
[Raw transfer]




CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]




PAL_A_7(1F1B)
PYRB_ECOLI
[Raw transfer]




PAL_B_5(4BJH)
PYRB_AQUAE
[Raw transfer]




CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]




EOP_A_7(2FZC)
PYRB_ECOLI
[Raw transfer]




CP_C_16(3R7F)
PYRB_BACSU
[Raw transfer]




CP_B_11(3R7F)
PYRB_BACSU
[Raw transfer]




PCT_C_10(1AT1)
PYRB_ECOLI
[Raw transfer]




PCT_A_7(1TU0)
PYRB_ECOLI
[Raw transfer]




EOB_C_10(2FZG)
PYRB_ECOLI
[Raw transfer]




PCT_A_9(1AT1)
PYRB_ECOLI
[Raw transfer]




PCT_C_8(3AT1)
PYRB_ECOLI
[Raw transfer]




PCT_A_7(3AT1)
PYRB_ECOLI
[Raw transfer]




EOB_A_9(2FZG)
PYRB_ECOLI
[Raw transfer]




EOP_C_8(2FZC)
PYRB_ECOLI
[Raw transfer]




PCT_C_9(1TUG)
PYRB_ECOLI
[Raw transfer]




PCT_C_8(1TU0)
PYRB_ECOLI
[Raw transfer]




EOZ_C_8(2FZK)
PYRB_ECOLI
[Raw transfer]




EOZ_A_7(2FZK)
PYRB_ECOLI
[Raw transfer]




PCT_A_10(1TUG)
PYRB_ECOLI
[Raw transfer]




AL0_G_9(2AIR)
PYRB_ECOLI
[Raw transfer]




NCD_G_10(1R0C)
PYRB_ECOLI
[Raw transfer]




MAL_A_5(8AT1)
PYRB_ECOLI
[Raw transfer]




MAL_C_6(2AT1)
PYRB_ECOLI
[Raw transfer]




AL0_A_10(2AIR)
PYRB_ECOLI
[Raw transfer]




NCD_A_9(1R0C)
PYRB_ECOLI
[Raw transfer]




MAL_C_6(7AT1)
PYRB_ECOLI
[Raw transfer]




MAL_C_6(8AT1)
PYRB_ECOLI
[Raw transfer]




MAL_A_5(7AT1)
PYRB_ECOLI
[Raw transfer]




MAL_A_5(2AT1)
PYRB_ECOLI
[Raw transfer]




CP_C_13(1ZA2)
PYRB_ECOLI
[Raw transfer]




CP_A_12(1ZA2)
PYRB_ECOLI
[Raw transfer]




3 PsiBlast_PDB 97.8955% -96 - C10 -3R7F 4.5 PYRB_BACSU
27 PsiBlast_CBE 97.0255%-102 - C10 -3R7F 3.5 PYRB_BACSU
26 PsiBlast_CBE 96.9555% -98 - C10 -3R7F 4.3 PYRB_BACSU
2 PsiBlast_PDB 96.2455%-103 - C10 -3R7D - PYRB_BACSU -
23 PsiBlast_CBE 94.7255% -93 - C10 -3R7L - PYRB_BACSU -
25 PsiBlast_CBE 94.2455% -93 - C10 -3R7L - PYRB_BACSU -
22 PsiBlast_CBE 94.2455% -91 - C10 -3R7L - PYRB_BACSU -
4 PsiBlast_PDB 93.4155% -92 - C10 -3R7L - PYRB_BACSU -
24 PsiBlast_CBE 93.2755% -90 - C10 -3R7L - PYRB_BACSU -
21 PsiBlast_CBE 92.8155% -91 - C10 -3R7L - PYRB_BACSU -
138 HHSearch 87.8755% -51 - C10 -3R7F 4.5 PYRB_BACSU
1 PsiBlast_PDB 83.3655% - - C10 -2AT2 - PYRB_BACSU -
137 HHSearch 82.7955% - - C10 -2AT2 - PYRB_BACSU -
12 PsiBlast_PDB 69.8234% -78 - C10 -5G1P - PYR1_HUMAN -
142 HHSearch 67.8437% -11 - C10 -3D6N - PYRB_AQUAE -
38 PsiBlast_CBE 67.7434% -69 - C10 -5G1O - PYR1_HUMAN -
40 PsiBlast_CBE 67.1434% -35 - C10 -5G1N - -
10 PsiBlast_PDB 66.5834% -45 - C10 -5G1N - PYR1_HUMAN -
33 PsiBlast_CBE 66.2634% -61 - C10 -5G1P - PYR1_HUMAN -
44 PsiBlast_CBE 66.1734% -38 - C10 -5G1N - PYR1_HUMAN -
143 HHSearch 66.1136% -14 - C10 -4BJH 6.0 PYRB_AQUAE
6 PsiBlast_PDB 64.3636% -16 - C10 -4BJH 5.3 PYRB_AQUAE
113 PsiBlast_CBE 62.2533% 20 - C10 -3AT1 3.1 PYRB_ECOLI
102 PsiBlast_CBE 62.1333% 24 - C10 -1TUG 4.2 PYRB_ECOLI
103 PsiBlast_CBE 61.6033% 22 - C10 -1TU0 3.6 PYRB_ECOLI
61 PsiBlast_CBE 60.8233% 27 - C10 -4KGV 7.9 ?
82 PsiBlast_CBE 60.7833% 22 - C10 -1R0C 3.7 PYRB_ECOLI
73 PsiBlast_CBE 60.6733% 19 - C10 -2FZG 2.8 PYRB_ECOLI
68 PsiBlast_CBE 60.6733% 25 - C10 -2IPO 6.0 PYRB_ECOLI
104 PsiBlast_CBE 60.6233% 18 - C10 -1TU0 3.8 PYRB_ECOLI
79 PsiBlast_CBE 60.5733% 22 - C10 -1ZA2 2.9 PYRB_ECOLI
51 PsiBlast_CBE 60.4933% 24 - C10 -1EKX 7.5 PYRB_ECOLI
114 PsiBlast_CBE 60.4233% 21 - C10 -3AT1 3.0 PYRB_ECOLI
70 PsiBlast_CBE 60.4133% 27 - C10 -2H3E 7.3 PYRB_ECOLI
101 PsiBlast_CBE 60.4033% 22 - C10 -1TUG 3.4 PYRB_ECOLI
119 PsiBlast_CBE 60.3733% 26 - C10 -1AT1 3.6 PYRB_ECOLI
59 PsiBlast_CBE 60.3033% 26 - C10 -4KGX 7.9 ?
122 PsiBlast_CBE 60.2333% 24 - C10 -1XJW 5.9 PYRB_ECOLI
105 PsiBlast_CBE 60.2133% 26 - C10 -1TTH 5.8 PYRB_ECOLI
55 PsiBlast_CBE 60.1533% 28 - C10 -4KH0 8.1 ?
81 PsiBlast_CBE 60.1433% 22 - C10 -1R0C 3.6 PYRB_ECOLI
76 PsiBlast_CBE 60.1233% 23 - C10 -2FZC 3.5 PYRB_ECOLI
121 PsiBlast_CBE 60.1033% 25 - C10 -1XJW 6.7 PYRB_ECOLI
53 PsiBlast_CBE 60.0833% 27 - C10 -4KH1 8.1 ?
126 PsiBlast_CBE 59.9733% 25 - C10 -1F1B 5.9 PYRB_ECOLI
67 PsiBlast_CBE 59.8933% 27 - C10 -2IPO 6.4 PYRB_ECOLI
107 PsiBlast_CBE 59.8633% 27 - C10 -8ATC 6.3 PYRB_ECOLI
100 PsiBlast_CBE 59.8133% 27 - C10 -1D09 7.0 PYRB_ECOLI
75 PsiBlast_CBE 59.8133% 23 - C10 -2FZC 2.2 PYRB_ECOLI
64 PsiBlast_CBE 59.8133% 28 - C10 -4F04 8.0 PYRB_ECOLI
110 PsiBlast_CBE 59.7933% 24 - C10 -8AT1 2.6 PYRB_ECOLI
71 PsiBlast_CBE 59.7433% 21 - C10 -2FZK 2.3 PYRB_ECOLI
77 PsiBlast_CBE 59.7133% 23 - C10 -2AIR 2.9 PYRB_ECOLI
72 PsiBlast_CBE 59.7033% 23 - C10 -2FZK 3.9 PYRB_ECOLI
108 PsiBlast_CBE 59.6533% 26 - C10 -8ATC 6.2 PYRB_ECOLI
78 PsiBlast_CBE 59.5933% 21 - C10 -2AIR 3.1 PYRB_ECOLI
115 PsiBlast_CBE 59.5733% 28 - C10 -2AT1 2.7 PYRB_ECOLI
106 PsiBlast_CBE 59.5633% 32 - C10 -1TTH 5.7 PYRB_ECOLI
125 PsiBlast_CBE 59.4933% 31 - C10 -1F1B 5.6 PYRB_ECOLI
16 PsiBlast_PDB 59.4033% 27 - C10 -1EKX 7.6 PYRB_ECOLI
50 PsiBlast_CBE 59.3633% 27 - C10 -1EKX 7.8 PYRB_ECOLI
60 PsiBlast_CBE 59.3533% 28 - C10 -4KGV 8.0 ?
120 PsiBlast_CBE 59.3333% 23 - C10 -1AT1 3.4 PYRB_ECOLI
80 PsiBlast_CBE 59.3133% 23 - C10 -1ZA2 2.8 PYRB_ECOLI
74 PsiBlast_CBE 59.1833% 27 - C10 -2FZG 5.1 PYRB_ECOLI
116 PsiBlast_CBE 59.1733% 23 - C10 -2AT1 2.7 PYRB_ECOLI
63 PsiBlast_CBE 59.0033% 26 - C10 -4F04 7.9 PYRB_ECOLI
58 PsiBlast_CBE 58.8933% 26 - C10 -4KGX 7.9 ?
13 PsiBlast_PDB 58.6636% 8 - C10 -1ML4 7.9 PYRB_PYRAB
112 PsiBlast_CBE 58.6433% 31 - C10 -7AT1 2.1 PYRB_ECOLI
54 PsiBlast_CBE 58.6333% 26 - C10 -4KH0 8.0 ?
52 PsiBlast_CBE 58.4633% 27 - C10 -4KH1 7.9 ?
99 PsiBlast_CBE 58.0333% 29 - C10 -1D09 6.8 PYRB_ECOLI
111 PsiBlast_CBE 57.9733% 30 - C10 -7AT1 2.7 PYRB_ECOLI
69 PsiBlast_CBE 57.9633% 27 - C10 -2H3E 7.3 PYRB_ECOLI
109 PsiBlast_CBE 57.8933% 30 - C10 -8AT1 2.8 PYRB_ECOLI