@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : jhp_0907: (2015-12-19 )
MKHLAPLIHIPFKALWLGTALSMFLSLNLNAEENPTKTEPKPAKGVKNKPKSPVTNVMMTNCDNLKDFNAKQKEVLKAAYQFGSKENLGYEMAGIAWKESCAGTYKINFSDPSAGIYHAYIPSVLKSYGHNNSPFLRNVMGELLIKDDAFASEVALKELLYWKTRYHDNLKDMIKSYNKGSRWEKNEKANADAEKYYEEIQDRIRRLKESKIFDSQSSNDQELQKSANSNLDLDPIGNAMPQTLAQTETQKSQIEKSQIEEAQTQKSQEMKEAASEQAIKKPLEKEKDKPMYLAQINSADFAPAKKSPKKPAKASPKRSSKNNISVKSNTKTASKNKEVCKNCSPGQRNAILANHITLMQEL
Atome Classification :
(20 SA)
-------------------------.........---10........20........30........40........50........60........70.--.......80........90..---.------.....100----.....-..----.110.......----120-...------.--..----.130-..---.....--------.140...-.-...150..----....-------.-----160.----...----.-----.-----.170.---......------180....---.----------------.---------------------------------.190----...--------.....200-........210.......220.......230...---....240.......250.......260........270.....-----..280.......290.......300.......310.......320.......330....-...340.......350.......360------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-------------------------MKHLA
P
L
I
H---I
P
F
K
A
L
W
L
G
T
A
L
S
M
F
L
SLNLNAEENPTKTEPKPAKGVKNKPKSPVT
N
V
M
MTNCDNLKDF
N
A
K
Q
--
K
E
V
L
K
A
A
Y
QFGSKENLGY
E
M
A---G------
I
A
W
K
E
SC-----
A
G
T
Y
K
-
I
N----FSDPSA
G
I
Y
H
A
----
Y
I
P
-
S
V
L
------
K
--SY----GH-N-N
S
---
P
F
L
R
N
--------
V
M
G
E
LLI-K-DDA
F
A
S
E
V
----
A
L
K
E
-------
L
-----
L
Y
W
K
----TRY----H-----D-----
N
L
K
D
M
---
I
K
SYNK------GSRWEKN---E----------------K---------------------------------ANA-----
D
A
E
--------
K
Y
Y
E
E
I
Q
--
D
R
I
R
R
L
K
E
SKIFDSQSS
N
D
Q
E
L
Q
K
SANSNLDLDP---IGNA
M
P
Q
T
L
A
Q
T
E
T
Q
K
S
Q
I
E
K
S
Q
I
E
-
E
A
Q
T
Q
K
S
Q
E
M
K
E
A
A
S
E
Q
-----
A
I
K
K
P
L
E
KEKDK
P
M
Y
L
A
QINSADFAPAKKSPKKPAKASPKRSSKN
N
I
S
V
KSNTKTASK
N
-
K
E
V
C
KNCSPGQRN
A
I
L
A
N
H
I
T
L
M
QEL------------------
16
HHSearch
59.78
11%
-11
- C4 -
1QSA
9
SLT_ECOLI
A:
[459-601]
----------------------------------------------------------------------------------------------------------
R
Y
T
S
G
K
E
I
P
Q
S
Y
---
A
M
---
A
------
I
A
R
Q
E
S
A
-----
W
N
P
K
V
-
K
S
-----
P
V
G
A
S
G
L
M
Q
I
----
M
P
G
-
T
A
T
H
T
V
---
K
--
M
F
----
S
I
-
P
-
G
Y
-----------------
S
S
P
G
Q
L
-
L
-
D
P
E
T
N
I
N
I
----
G
T
S
Y
-------
L
-----
Q
Y
V
Y
----
Q
Q
F
----
G
-----
N
-----
N
R
I
F
S
---
S
A
A
Y
N
A
------
G
P
G
R
V
R
T
---
W
L
G
N
S
AGRID
A
V
A
F
V
E
S
I
---------------------------------
P
F
S
-----
E
T
R
--------
G
Y
V
K
N
V
L
--
A
Y
D
A
Y
Y
R
Y
F
M
G
D
K
P
T
L
M
S
A
T
E
W
G
R
R
Y
-------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
Fugue
59.59
18%
19
- C4 -
4NOM
-
LGMN_MOUSE
A:
[26-432]
EDG
G
K
H
W
V
V
I
V
A
GSNGWYNY
R
H
Q
A
D
A
C
H
A
Y
Q
I
I
H
R
N
G
I
P
D
E
Q
I
I
V
M
----
M
Y
D
D
I
-
A
N
S
E
E
N
P
T
P
------
G
V
V
I
N
R
P
N
G
--
T
D
V
Y
K
---
G
V
L
K
D
Y
T
G
E
D
VT
P
E
N
F
L
A
V
L
R
-
G
D
A
E
A
V
K
G
K
G
S
---
G
------
K
V
L
K
S
G
P
-----
R
D
H
V
F
-
I
Y
----
F
T
D
H
G
A
T
G
I
L
V
----
F
P
N
-
D
D
L
------
H
--
V
K
----
D
L
-
N
-
K
T
I
R
Y
M
Y
E
H
K
--------
M
Y
Q
K
M
V
F
-
Y
-
I
E
A
C
E
S
G
S
----
M
M
N
H
-------
L
PDDIN
V
Y
A
T
----
T
A
A
----
N
-----
P
-----
K
E
S
S
Y
---
A
C
Y
Y
D
E
ERGTYL
G
D
W
Y
S
V
N
---
W
----------------
M
---------------------------------
E
D
S
-----
D
V
E
DLTKET
L
H
K
Q
Y
H
L
V
K
--
S
H
T
N
T
S
H
V
M
Q
Y
G
N
K
S
I
S
T
M
K
V
M
Q
F
Q
G
M
K
H
R
A
S
S
P
---
I
S
L
P
P
V
T
H
L
D
L
T
P
S
P
D
V
P
L
T
I
L
K
R
K
-
L
L
R
T
N
D
V
K
E
S
Q
N
L
I
G
Q
I
-----
Q
Q
F
L
D
A
R
H
V
I
E
K
S
V
H
K
I
V
S
L
L
A
G
F
---------
G
E
T
A
E
R
H
L
S
E
R
T
M
L
T
A
H
D
C
Y
Q
E
A
V
T
H
F
R
T
H
C
F
N
W
H
S
V
T
Y
E
H
A
L
R
Y
L
Y
V
L
A
N
L
C
E
A
PYP
I
D
R
I
E
M
A
M
D
K
V
CL
38
Fugue
52.60
8%
46
- C1 -
2W38
4
?
A:
[7-438]
-----------IPHRLVG
K
A
L
Y
ESY
Y
D
H
F
G
Q
M
D
I
---
L
S
D
-----
G
S
L
Y
L
I
Y
R
R
A
T
E
H
V
G
G
S
D
G
R
V
V
F
S
K
L
E
G
G
I
W
S
A
P
T
I
V
A
Q
A
G
G
Q
D
F
R
D
V
A
G
G
T
M
P
S
--
G
R
I
V
-
A
A
S
T
V
Y
E
T
G
E
V
K
V
Y
V
S
DDS
G
------
V
T
W
V
H
K
F
-----
T
L
A
R
G
-
G
A
----
D
Y
N
F
A
H
G
K
S
F
Q
V
GA
R
Y
V
I
-
P
L
Y
------
A
--
A
T
----
G
V
-
N
-
Y
E
---
L
K
W
L
E
SSDGGETW
G
E
G
S
T
I
Y
-
S
-
G
N
T
P
Y
N
E
T
----
S
Y
L
P
VGDG
V
I
L
A
-----
V
A
R
V
----
G
S
G
----
A
-----
G
-----
G
A
L
R
Q
---
F
I
S
L
D
D
------
G
G
T
W
T
D
Q
---
G
----------------
N
VTAQNGDSTDILVA
P
S
L
S
Y
I
Y
S
EG
G
T
P
H
V
V
L
L
Y
T
N
R
-----
T
T
H
--------
F
C
Y
Y
R
T
I
--
L
L
A
K
A
V
A
G
S
S
G
W
T
E
R
V
P
V
Y
S
A
P
A
A
S
G
Y
T
S
Q
V
V
L
G
---
G
R
R
I
L
G
N
L
F
R
E
T
S
S
T
T
S
G
A
Y
Q
F
E
V
Y
-
L
G
G
V
P
D
F
E
S
D
W
F
S
V
S
S
N
-----
S
L
Y
T
L
S
H
G
L
Q
R
S
P
R
R
V
V
V
E
F
A
R
S
S
S
P
S
T
W
N
I
V
M
P
S
Y
F
N
D
G
G
H
K
G
S
G
A
Q
V
E
V
G
S
L
N
I
R
L
G
-
T
G
A
A
V
W
G
T
-
G
Y
F
G
G
I
D
N
S
A
T
T
R
F
A
T
G
Y
Y
R
V
R
A
W
I----------
14
HHSearch
51.93
19%
6
- C4 -
1GBS
-
LYG_CYGAT
A:
[49-184]
---------------------------------------------------------------------------------------------------
K
--
T
I
I
K
K
V
G
E
K
L
C
V
E
P
A
V
---
I
A
---
G
------
I
I
S
R
E
S
H
-----
A
G
K
V
L
-
K
N
GWG-
D
R
G
N
G
F
G
L
M
Q
V
----
D
K
R
-
S
H
K
---------
P
Q
----
G
----------------------------
T
-
W
-
N
G
E
V
H
I
T
Q
----
G
T
T
I
-------
L
-----
T
D
F
I
----
K
R
I
Q
K
K
F
P
SWT
K
D
Q
-----
Q
L
K
G
G
---
I
S
A
Y
N
A
------
G
A
G
N
V
R
S
YAR
M
----------------
D
---------------------------------
I
G
T
-----
T
H
D
--------
D
Y
A
N
D
V
V
--
A
R
A
Q
Y
Y
K
Q
H
G
Y
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
51.03
14%
-39
- C4 -
3W6B
1
?
A:
[52-180]
-----------------------------------------------------------------------------------------------------------
A
Y
G
K
G
G
D
F
A
L
L
---
L
S
---
A
------
V
I
K
K
E
S
Y
-----
F
G
D
G
L
S
G
-----
S
P
S
A
G
D
G
L
M
Q
V
----
E
P
N
-
T
R
N
---------
A
Y
L
S
Q
F
S
A
-
K
-------
Y
G
H
------------
A
Y
N
H
-
S
-
S
E
Q
D
Q
V
Y
M
----
G
S
L
I
-------
L
-----
N
E
K
I
----
V
R
F
----
G
-----------
S
I
Y
S
G
---
L
L
H
Y
N
G
------
G
D
Y
W
Y
P
G
---
A
----------------
T
----------------------------------
D
S
YGRPI
L
A
D
--------
Q
Y
A
N
T
V
Y
--
A
Q
Y
K
S
Y
G
G
R
Y
S
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
Fugue
49.64
17%
20
- C4 -
1IUR
-
A:
[1-88]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
H
--------
H
H
H
H
H
L
V
-
P
-
R
G
S
I
L
K
E
V
----
T
S
V
V
-------
E
-----
Q
A
W
K
----
L
P
-----
E
-----
S
-----
E
R
K
K
I
---
I
R
R
L
Y
L
------
K
W
H
P
D
K
N
---
P
----------------
E
---------------------------------
N
H
D
-----
I
A
N
--------
E
V
F
K
H
L
Q
--
N
E
I
N
R
L
E
K
Q
A
F
L
D
Q
N
A
D
R
A
S
R
R
T
F
---------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
49.63
22%
42
- C4 -
3DTP
-
MYH11_CHICK (first)
A:
[830-957]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
A
Y
L
----
K
L
R
N
-------
W
-----
Q
W
W
------
R
L
----
F
-----
T
-----
K
V
K
P
L
---
L
Q
S
A
E
R
------
E
K
E
M
A
S
M
---
K
----------------
E
---------------------------------
E
F
T
-----
R
L
K
--------
E
A
L
E
K
S
E
--
A
R
R
K
E
L
E
E
K
M
V
S
L
L
Q
E
K
N
D
L
Q
L
Q
V
Q
A
E
Q
D
---------------
N
L
A
D
A
E
E
R
C
D
Q
L
I
K
N
K
I
Q
L
E
A
K
V
K
E
M
N
E
R
L
E
D
E
E
E
M
N
A
E
L
T
A
K
K
R
K
L
E
D
E
C
S
E
L
K
R
D
I
D
D
L
E
L
T
L
--------------------------------------------------------------------------------
6
PsiBlast_PDB
47.90
27%
37
- C4 -
2PYB
4
?
A:
[1-94]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
D
L
D
A
I
Q
L
----
K
L
Q
E
-------
L
-----
L
A
S
L
----
H
I
F
----
Y
-----
S
-----
N
L
R
G
I
H
W
N
I
K
D
T
N
F
------
F
V
I
H
K
K
T
---
Q
----------------
K
---------------------------------
L
Y
E
-----
Y
I
E
--------
K
I
I
D
I
V
A
--
E
R
S
R
M
L
G
----
Y
D
S
E
F
R
Y
S
E
F
M
K
K
S
F
I
K
E
L
D
I
E
S
---
T
S
N
F
L
P
S
M
E
S
I
V
C
S
L
T
E
I
L
K
N
I
F
G
M
-
R
K
L
I
D
T
A
G
D
Y
G
T
A
N
I
M
D
-----
D
I
M
S
D
L
E
K
H
L
W
M
H
K
A
L
L
E
N
C
D
-----------------------------------------------------------------------------------
12
HHSearch
47.73
14%
-20
- C4 -
1LSG
-
LYSC_CHICK
A:
[9-117]
--------------------------------------------------------------------------------------------------------
L
A
A
A
M
K
R
H
G
L
D
N
Y
R
---
G
Y
---
S
L
G
N
W
V
C
A
A
K
F
E
S
N
-----
F
N
T
Q
A
-
T
N
R
N
T-
D
G
S
T
D
Y
G
I
L
Q
I
----
N
S
R
-
W
W
C
------
N
DG
R
T
----
P
G
-
S
----------------------
R
N
L
C
-
N
-
I
P
C
S
A
L
L
S
SDI
T
A
S
V
N
-------
C
-----
A
K
K
I
----
V
S
D
----
G
-----------
N
G
M
N
A
---
W
V
A
W
R
N
------
R
C
K
G
T
D
V
---
Q
----------------
A
---------------------------------
W
I
R
-----
G
C
R
--------
L
Q
Q
H
H
L
G
--
G
A
K
Q
A
G
D
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
46.87
15%
4
- C4 -
3GXR
2
?
A:
[48-185]
------------------------------------------------------------------------------------------------------
S
F
I
N
N
V
A
K
K
H
V
V
D
P
A
V
---
I
A
---
A
------
I
I
S
R
E
S
R
AGNVI
F
N
T
T
P
-
P
G
WG--
D
N
Y
N
G
F
G
L
M
Q
V
----
D
K
R
-
Y
H
E
---------
P
R
-------------------------------
G
-
A
-
W
-
N
S
E
E
H
I
D
Q
----
A
T
G
I
-------
L
-----
V
N
F
I
Q
L
I
Q
K
K
F
----
P
-----
S
WS
T
E
Q
Q
L
K
G
A
---
I
A
A
Y
N
T
------
G
D
G
R
V
E
S
YES
V
----------------
D
---------------------------------
S
R
T
-----
T
G
K
--------
D
Y
S
N
D
V
V
--
A
R
A
Q
W
Y
K
K
N
G
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
HHSearch
44.48
14%
-38
- C4 -
1YRO
3
LALBA_MOUSE
A:
[16-113]
------------------------------------------------------------------------------------------------------------
D
G
Y
Q
G
I
S
L
L
E
---
W
A
---
C
------
V
L
F
H
T
S
G
-----
Y
D
T
Q
A
-
V
V
N
D
--
N
G
S
T
E
Y
G
L
F
Q
I
----
S
D
R
-
F
W
C
------
K
--
S
S
----
E
F
-
P
-
E
S
---
E
N
I
C
G
--------
I
S
C
D
K
L
L
-
D
D
E
L
D
D
D
I
A
C
----
A
K
K
I
-------
L
-----
A
I
--------
K
----
G
-----
I
-----
D
Y
W
K
A
---
Y
K
P
M
C
S
------
E
K
L
E
Q
W
R
---
C
----------------
E
---------------------------------
K
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
43.90
17%
-56
- C4 -
2NWD
-
LYSC_HUMAN
X:
[19-102]
-------------------------------------------------------------------------------------------------------------
G
Y
R
G
I
S
L
A
N
---
W
M
---
C
------
L
A
K
W
E
S
G
-----
Y
N
T
R
A
-
T
N
YNAG
D
R
S
T
D
Y
G
I
F
Q
I
----
N
S
R
-
Y
W
C
---------
N
D
----
G
K
-
T
-
P
G
AV-
N
A
C
-
H
--------
L
S
C
S
A
L
L
-
Q
D
N
I
A
D
A
V
A
C
----
A
K
R
V
-------
V
-----
R
D
P
Q
----
G
I
R
----
A
-----
W
-----
V
A
W
R
N
---
R
C
Q
N
R
D
------
V
R
Q
Y
V
Q
G
---
C
----------------
G
---------------------------------
V
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
43.72
25%
37
- C4 -
1T7L
1
METE_THEMA
A:
[359-484]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
L
K
E
-------
K
-----
L
A
F
A
----
K
E
K
----
L
-----
E
-----
E
L
K
-
M
---
L
K
D
F
L
E
------
G
K
T
F
D
L
-------------------------------------------------------
P
N
V
-----
S
F
E
--------
D
F
A
V
D
L
Q
A
V
E
R
V
R
N
L
P
E
D
S
F
R
R
E
K
E
Y
T
E
R
D
R
I
Q
R
E
R
L
N
L
P
L
F
P
T
T
T
I
G
-
S
F
P
Q
T
-
P
E
V
R
K
M
R
S
K
Y
R
K
G
E
I
--------
S
K
E
E
Y
E
A
F
I
K
E
-----
Q
I
K
K
A
I
E
L
Q
E
E
I
G
L
D
V
L
V
H
G
E
F
E
R
T
D
M
V
E
F
F
A
E
K
L
N
G
I
A
T
T
Q
N
G
W
V
L
S
Y
G
S
R
C
Y
R
P
P
I
I
-
Y
G
T
V
T
R
P
E
P
M
T
L
K
E
I
T
Y
A
Q
S
L
T
E
K
P
V
------------------
23
HHSearch
43.60
14%
-45
- C4 -
1QQY
-
LYSC1_CANFA
A:
[21-114]
---------------------------------------------------------------------------------------------------------------
H
G
Y
S
L
A
N
---
W
V
---
C
------
M
A
E
Y
E
S
N
-----
F
N
T
Q
A
-
F
N
G
R
NS
N
G
S
S
D
Y
G
I
F
Q
L
----
N
S
K
-
W
W
C
------
K
---
S
----
N
S
H
S
-
S
A
---
N
A
C
-
N
--------
I
M
C
S
K
F
L
-
D
D
N
I
D
D
D
I
A
C
----
A
K
R
V
-------
V
-----
K
D
-------
P
N
----
G
-----
M
-----
S
A
W
V
A
---
W
V
K
H
C
K
------
G
K
D
L
S
K
Y
---
L
----------------
A
---------------------------------
S
C
N
-----
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
HHSearch
43.19
17%
10
- C4 -
1IIZ
-
LYS_ANTMY
A:
[24-111]
------------------------------------------------------------------------------------------------------------------------
D
W
V
---
C
------
L
V
E
N
E
S
A
-----
R
Y
T
D
K
-
I
A
N
V
NK
N
G
S
R
D
Y
G
L
F
Q
I
----
N
D
K
Y
W
C
S
KGSTPG
K
--
D
C
----
N
V
-
T
---------
C
------------
S
Q
L
L
-
T
D
D
I
T
V
A
S
T
C
----
A
K
K
I
-------
Y
-----
K
R
--------
T
----
K
-----
F
-----
D
A
W
------
S
G
W
D
N
------
H
C
N
H
S
N
P
---
D
----------------
I
---------------------------------
S
S
C
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
42.77
25%
43
- C4 -
3BQ6
-
METE_THEMA
A:
[359-484]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
L
K
E
-------
K
-----
L
A
F
A
----
K
E
K
----
L
-----
E
-----
E
L
K
-
M
---
L
K
D
F
L
E
------
G
K
T
F
D
L
-------------------------------------------------------
P
-----------------------
L
Q
A
V
E
R
V
R
N
L
P
E
D
S
F
R
R
E
K
E
Y
T
E
R
D
R
I
Q
R
E
R
L
N
L
P
L
F
P
T
T
T
I
G
-
S
F
P
Q
T
-
P
E
V
R
K
M
R
S
K
Y
R
K
------------
K
E
E
Y
E
A
F
I
K
E
-----
Q
I
K
K
A
I
E
L
Q
E
E
I
G
L
D
V
L
V
H
G
E
F
E
R
T
D
M
V
E
F
F
A
E
K
L
N
G
I
A
T
T
Q
N
G
W
V
L
S
Y
G
S
R
C
Y
R
P
P
I
I
-
Y
G
T
V
T
R
P
E
P
M
T
L
K
E
I
T
Y
A
Q
S
L
T
E
K
P
V
------------------
10
HHSearch
42.51
14%
-12
- C4 -
3B72
5
LYSC_CHICK
A:
[26-134]
--------------------------------------------------------------------------------------------------------
L
A
A
A
M
K
R
H
G
L
D
N
Y
R
---
G
Y
---
S
L
G
N
W
V
C
A
A
K
F
E
S
N
-----
F
N
T
Q
A
-
T
N
R
N
T-
D
G
S
T
D
Y
G
I
L
Q
I
----
N
S
R
-
W
W
C
------
N
DG
R
T
----
P
G
-
S
----------------------
R
N
L
C
-
N
-
I
P
C
S
A
L
L
S
SDI
T
A
S
V
N
-------
C
-----
A
K
K
I
----
V
S
D
----------
G
-----
N
G
M
N
A
---
W
V
A
W
R
N
------
R
C
K
G
T
D
V
---
Q
----------------
A
---------------------------------
W
I
R
-----
G
C
R
--------
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
42.38
18%
-36
- C4 -
2Z2F
3
LYSC2_BOVIN
A:
[22-114]
----------------------------------------------------------------------------------------------------------------
G
V
S
L
A
N
---
W
L
---
C
------
L
T
K
W
E
S
S
-----
Y
N
T
K
A
-
T
N
Y
N
PS
S
E
S
T
D
Y
G
I
F
Q
I
----
N
S
K
-
W
W
C
------
N
--
D
G
----
K
T
-
P
-
N
A
---
V
D
G
C
H
--------
V
S
C
S
E
L
M
E
N
-
D
I
A
K
A
V
A
C
----
A
K
H
I
-------
V
-----
S
E
--------
Q
----
G
-----
I
-----
T
A
W
V
A
---
W
K
S
H
C
R
------
D
H
D
V
S
S
Y
---
V
----------------
E
---------------------------------
G
C
T
-----
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
HHSearch
41.67
18%
-33
- C4 -
1JUG
1
LYSC1_TACAC
A:
[19-99]
-------------------------------------------------------------------------------------------------------------
G
Y
Q
H
I
T
L
P
N
---
W
V
---
C
------
T
A
F
H
E
S
S
-----
Y
N
T
R
A
-
T
N
H
N
T-
D
G
S
T
D
Y
G
I
L
Q
I
----
N
S
R
-
Y
W
C
---------
H
D
----
G
K
-
T
P
G
S
---
K
N
A
C
N
--------
I
S
C
S
K
L
L
-
D
-
D
D
I
T
D
D
L
K
----
C
A
K
K
-------
I
-----
A
G
E
A
----
K
G
L
----
T
-----
P
-----
W
V
A
W
K
---
S
K
C
R
G
H
------
D
L
S
K
F
K
C
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
41.18
25%
47
- C4 -
1XR2
1
METE_THEMA
A:
[359-484]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
L
K
E
-------
K
-----
L
A
F
A
----
K
E
K
----
L
-----
E
-----
E
L
K
-
M
---
L
K
D
F
L
E
------
G
K
T
-----------------------------------------------------------------------------
D
F
A
V
D
L
Q
A
V
E
R
V
R
N
-
P
E
D
S
F
R
R
E
K
E
Y
T
E
R
D
R
I
Q
R
E
R
L
N
L
P
L
F
P
T
T
T
I
G
-
S
F
P
Q
T
-
P
E
V
R
K
M
R
S
K
-----
I
--------
S
K
E
E
Y
E
A
F
I
K
E
-----
Q
I
K
K
A
I
E
L
Q
E
E
I
G
L
D
V
L
V
H
G
E
F
E
R
T
D
M
V
E
F
F
A
E
K
L
N
G
I
A
T
T
Q
N
G
W
V
L
S
Y
G
S
R
C
Y
R
P
P
I
I
-
Y
G
T
V
T
R
P
E
P
M
T
L
K
E
I
T
Y
A
Q
S
L
T
E
K
P
V
------------------