@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo0534: (2016-03-16 )
METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEAARKKIYQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEFAKTLDAAAKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDAVRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVSGPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGIVDLSLAPTPAIGDSVAHILEEMGLEMVGTHGTTAALALLNDAVKKGGVMACGHVGGLSGAFIPVSEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTAETLAAMIADEAAIGVINNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFKN
Atome Classification :
(20 SA)
----------------------------.........10........20........30........40.......-.50.........60........70.---.--....-..80...-....-.90....-....100.......110......----.120.......130.......140-----.-......-.150.......160....-.....170.......180.---......190..-.....200.......210.......220.......230.......240......-.250.......260.....-..270.......-..280---------------------------------------.......---------..290.......300..------..-....----------------.310.....--..320....----....330......-.340......--..-.-350..-.....360.....-..370...-----..-...380....-------....390-----....---.....400----.......410.....--..420.......430..------------...--.--.440.......450----------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
----------------------------M
E
T
N
Q
I
L
E
T
I
R
M
I
E
E
EKL
D
I
R
T
I
T
M
G
I
S
L
L
DCMDGD
G
E
A
A
R
K
K
I
Y
Q
K
I
-
V
T
-
K
A
R
N
L
V
A
V
G
E
A
I
E
SEFGI
P
I
IN---K--RISV-
T
P
I
A
I
I
A-GSSA-D
T
D
Y
V
E
F
-
A
K
T
L
D
A
A
A
K
E
V
G
V
NFIG
G
Y
S
A
L
V
----
Q
KGYTK
G
D
E
I
L
I
R
S
I
P
Q
A
L
A
Q
T
E
------
R
-
V
C
S
SVN-VGSTRTGI
N
M
D
A
--
V
R
Q
M
-
G
E
V
I
K
E
T
ADLTADTQGL
G
C
---
A
K
L
V
V
F
A
NAVE-DNP
F
M
A
GAFHGVGEA
D
C
V
I
N
VGVS
G
P
G
V
V
K
R
A
I
E
K
VKGE
P
F
D
I
V
A
E
T
V
K
Q
T
A
F
K
-
I
T
R
M
G
Q
L
V
G
Q
V
A
S
EKLGV
P
-
F
G
I
--
V
D
LSLAP-TPA-----------------------------------------I
G
D
S
V
A
H
---------
I
L
E
EM
G
L
E
M
VGTH--
G
T
------
T
A
-
A
L
A
L
----------------
L
N
D
A
V
KKG
G
--
V
M
A
C-GHVG----GLS
G
A
F
I
PVSEDA-
G
M
--
I
E
A
V
Q
Q--GA-L-
N
L
E
K
L
-
E
A
M
T
A
I
C
SVG
L
D
M
-
I
AVP-GD
T
-----
T
A
-
E
T
L
A
-
A
M
I
A
D
-------
E
A
A
I
G
-------
V
INN---K
T
T
A
V
R
V
I
----PASGTKVG
D
M
V
E
FGG--LLGTAPVMPVNGKS
S
V
D
------------
F
I
A--R--GGRIPAPIHSFKN-----------
1
PsiBlast_PDB
79.07
74%
3
- C4 -
2HA9
-
Y239_STRPN
A:
[2-440]
-----------------------------
D
I
R
Q
V
T
E
T
I
A
M
I
E
E
Q
N
F
D
I
R
T
I
T
M
G
I
S
L
L
D
C
I
D
P
D
I
N
R
A
A
E
K
I
Y
Q
K
I
-
T
T
-
K
A
A
N
L
V
A
V
G
D
E
I
A
A
E
L
G
I
P
I
V
N
---
K
--
R
V
S
V
-
T
P
I
S
L
I
G
-
A
A
T
D
-
A
T
D
Y
V
V
L
-
A
K
A
L
D
K
A
A
K
E
I
G
V
D
F
I
G
G
F
S
A
L
V
----
Q
K
G
Y
Q
K
G
D
E
I
L
I
N
S
I
P
R
A
L
A
E
T
D
------
K
-
V
C
S
S
V
N
-
I
G
S
T
K
S
G
I
N
M
T
A
--
V
A
D
M
-
G
R
I
I
K
E
T
A
N
L
S
----
D
M
G
V
---
A
K
L
V
V
F
A
N
A
V
E
-
D
N
P
F
M
A
-
A
F
H
G
V
G
E
A
D
V
I
I
N
V
G
V
S
G
P
G
V
V
K
R
A
L
E
K
V
R
G
Q
S
F
D
V
V
A
E
T
V
K
K
T
A
F
K
-
I
T
R
I
G
Q
L
V
G
Q
M
A
S
E
R
L
G
V
E
-
F
G
I
--
V
D
L
S
L
A
P
-
T
---------------------------------------------
D
S
V
A
R
---------
V
L
E
E
M
G
L
E
T
V
G
T
H
--
G
T
------
T
A
-
A
L
A
L
----------------
L
N
D
Q
V
K
K
G
G
--
V
M
A
C
-
N
------------------
D
E
-
G
M
--
I
A
A
V
Q
N
--
G
S
-
L
-
N
L
E
K
L
-
E
A
M
T
A
I
C
S
---
D
M
-
I
A
I
P
-
E
D
T
-----
P
A
-
E
T
I
A
-
A
M
I
A
D
-------
E
A
A
I
G
-------
V
I
N
M
---
K
T
T
A
V
R
I
I
----
P
K
G
--
K
E
G
D
M
I
E
F
-------
T
A
P
V
M
K
V
N
G
A
S
S
V
D
------------
F
I
S
--
R
--
G
G
Q
I
P
A
P
I
----------------
8
HHSearch
77.45
78%
2
- C4 -
2HA9
-
Y239_STRPN
A:
[1-440]
----------------------------
M
D
I
R
Q
V
T
E
T
I
A
M
I
E
E
Q
N
F
D
I
R
T
I
T
M
G
I
S
L
L
D
C
I
D
P
D
I
N
R
A
A
E
K
I
Y
Q
K
I
-
T
T
-
K
A
A
N
L
V
A
V
G
D
E
I
A
A
E
L
G
I
P
I
V
N
---
K
--
R
V
S
V
-
T
P
I
S
L
I
G
-
A
A
T
D
-
A
T
D
Y
V
V
L
-
A
K
A
L
D
K
A
A
K
E
I
G
V
D
F
I
G
G
F
S
A
L
V
----
Q
K
G
Y
Q
K
G
D
E
I
L
I
N
S
I
P
R
A
L
A
E
T
D
------
K
-
V
C
S
S
V
N
-
I
G
S
T
K
S
G
I
N
M
T
A
--
V
A
D
M
-
G
R
I
I
K
E
T
A
N
----
L
S
D
M
G
V
---
A
K
L
V
V
F
A
N
A
V
E
-
D
N
P
F
M
A
-
A
F
H
G
V
G
E
A
D
V
I
I
N
V
G
V
S
G
P
G
V
V
K
R
A
L
E
K
V
R
G
Q
S
F
D
V
V
A
E
T
V
K
K
T
A
F
K
-
I
T
R
I
G
Q
L
V
G
Q
M
A
S
E
R
L
G
V
E
-
F
G
I
--
V
D
L
S
L
A
P
-
T
---------------------------------------------
D
S
V
A
R
---------
V
L
E
E
M
G
L
E
T
V
G
T
H
--
G
T
------
T
A
-
A
L
A
L
----------------
L
N
D
Q
V
K
K
G
G
--
V
M
A
C
-
N
------------------
D
E
-
G
M
--
I
A
A
V
Q
N
--
G
S
-
L
-
N
L
E
K
L
-
E
A
M
T
A
I
C
S
---
D
M
-
I
A
I
P
-
E
D
T
-----
P
A
-
E
T
I
A
-
A
M
I
A
D
-------
E
A
A
I
G
-------
V
I
N
M
---
K
T
T
A
V
R
I
I
----
P
K
--
G
K
E
G
D
M
I
E
F
-------
T
A
P
V
M
K
V
N
G
A
S
S
V
D
------------
F
I
S
--
R
--
G
G
Q
I
P
A
P
I
----------------
21
Fugue
68.19
18%
-62
- C5 -
4TQT
8
?
A:
[14-490]
------------------------------
A
S
K
V
I
K
G
G
T
V
I
T
A
D
----
R
T
F
R
A
D
I
L
I
E
D
-----------------------
G
K
I
A
A
I
G
D
S
L
E
G
D
E
V
I
D
A
-----
S
--
G
C
Y
V
-
M
P
G
G
I
D
P
-
H
T
H
L
-
Q
M
P
F
M
G
--
T
Y
S
S
D
D
F
D
T
G
T
A
A
A
L
A
G
G
T
T
M
V
V
----
D
F
V
L
P
D
S
E
G
N
L
L
D
A
L
Q
E
W
F
Q
K
A
G
------
K
-
A
R
T
D
Y
S
-
F
H
M
A
I
T
G
W
N
E
R
T
--
F
N
E
M
-
A
E
V
V
K
---------
R
G
I
N
T
---
F
H
F
M
A
Y
K
G
A
L
M
V
N
D
D
E
M
F
A
S
F
Q
R
C
A
E
L
G
A
M
P
L
V
H
A
E
N
G
D
I
V
A
Q
L
Q
A
K
L
M
A
E
G
N
D
G
P
E
A
H
A
Y
S
R
P
P
E
-
V
E
G
E
A
T
N
R
A
I
M
I
A
D
Q
A
G
V
P
-
L
Y
V
--
V
H
V
S
C
E
Q
-
S
H
E
-----------------------------------------
A
I
R
R
A
R
Q
K
GMR
V
F
G
E
P
L
I
Q
H
L
T
L
D
E
S
E
Y
H
--
N
R
------
D
W
-
D
Y
A
A
R
R
VMSPPFRD
K
L
N
Q
D
S
L
W
A
G
L
A
A
G
S
L
Q
C
V
A
T
-
D
H
C
---------
A
F
T
T
E
Q
K
R
Y
-
G
I
GN
F
T
K
I
P
N
--
G
T
-
G
-
G
L
E
---
E
R
M
P
V
L
W
T
R
G
V
R
T
-
G
R
L
T
-
P
N
E
-----
F
V
-
A
V
T
S
-
T
N
I
A
K
I
L
NIYPQ
K
G
A
V
V
PGADAD
L
V
I
W
D
---
P
E
T
T
K
K
I
S
----
A
K
T
Q
H
S
S
I
D
Y
N
V
F
E
G
F
E
L
K
G
L
P
I
M
T
L
S
R
G
R
I
A
F
D
KGQVTAKPGD
G
R
F
I
E
--
R
E
P
N
G
A
V
N
R
A
L
S
Q
W
K
E
I
V
A
P
R
K
V
E
R
S
A
20
Fugue
56.58
17%
-53
- C5 -
5A07
3
?
A:
[40-434]
----------------------------
D
H
D
A
E
V
L
D
S
I
M
D
R
L
H
E
P
L
Y
E
K
D
T
---
F
D
P
N
E
V
L
A
E
N
K
Q
L
Y
E
E
F
L
L
Q
E
I
-
S
E
P
K
V
D
N
L
V
R
S
G
D
P
L
A
G
--------------
K
A
K
G
-
T
I
L
S
L
V
R
------
N
S
D
L
E
D
I
-
I
S
S
I
Q
Q
L
E
E
E
Y
N
K
N
F
G
Y
P
Y
T
F
L
N
----
D
E
E
F
T
---
D
E
F
K
D
G
I
K
S
I
L
P
K
D
R
------
V
-
V
E
F
G
T
---------
I
G
P
D
N
--
W
N
M
P
-
D
S
I
D
R
E
R
Y
D
Q
E
M
D
K
M
S
K
E
N
---
I
Q
Y
A
E
V
E
S
Y
H
N
-
M
C
R
F
Y
S
K
E
F
Y
H
--------
H
P
L
L
S
K
Y
K
Y
V
W
R
L
------
E
P
N
V
N
F
Y
C
K
I
N
Y
D
V
F
Q
-
F
M
N
K
N
-----------
D
K
I
-
Y
G
F
--
V
-
L
N
L
Y
D
-
S
P
Q
-----------------------------------------
T
I
E
T
-------------
L
W
T
S
T
M
D
F
V
E
E
H
--
P
N
YLNV--
N
G
-
A
F
A
W
----------------
L
K
D
N
S
Q
N
----
P
K
N
Y
-
D
Y
T
Q
----
G
Y
S
T
C
H
F
W
T
N
--------
F
E
I
V
D
L
--
D
F
-
L
-
R
S
E
P
Y
-
E
K
Y
M
Q
Y
L
E
E
K
G
G
F
-
Y
Y
E
R
W
G
D
A
-----
P
V
-
R
S
L
A
L
A
L
F
A
D
-------
K
S
S
I
H
-------
W
F
R
D
IGY
H
H
T
P
Y
T
N
C
----
P
T
C
P
A
D
S
D
R
---
C
N
G
--
N
C
V
P
G
K
F
T
P
W
S
D
L
D
N
Q
N
------------
C
Q
A
--
T
--
W
I
R
H
S
M
S
E
E
E
L
E
M
Y----------
27
Fugue
53.85
17%
-39
- C1 -
1YT3
11
RND_ECOLI
A:
[1-375]
----------------------------
M
N
Y
Q
M
I
--------
T
T
D
D
A
L
A
S
L
C
E
A
V
R
A
F
P
A
I
A
L
D
T
E
F
V
R
T
R
T
Y
Y
P
Q
-
L
G
-
L
I
Q
L
F
D
G
E
H
L
A
L
I
D
P
L
G
I
T
-----------
D
W
-
S
P
L
K
A
I
L
-
R
D
P
S
-
I
T
K
F
L
H
A
G
S
E
D
L
E
V
F
L
N
V
F
G
----------------------------
E
L
P
Q
P
L
I
D
T
Q
------
I
-
L
A
A
F
C
G
-
R
P
M
S
W
G
-----------
F
-
A
S
M
V
E
E
Y
S
G
V
T
L
D
K
S
E
-
S
R
---
T
D
W
L
A
R
P
L
T
E
R
-
Q
C
E
Y
A
A
A
D
V
W
Y
L
L
P
I
T
A
K
L
M
V
E
T
E
A
S
G
W
L
P
A
A
L
D
E
C
R
L
M
Q
M
R
R
Q
E
V
V
A
P
E
D
A
W
R
D
I
T
N
A
W
Q
L
----
R
T
R
Q
L
A
C
L
-
Q
L
L
--
A
D
W
R
L
R
K
-
A
R
E
-----------------------------------------
R
D
L
A
V
N
F
---------
V
V
R
E
E
H
L
W
S
V
A
R
Y
MP
G
S
------
L
G
-
E
L
D
S
----------------
L
-----------------------
G
L
S
G
S
E
I
R
F
-
H
G
K
-
T
L
--
L
A
L
V
E
K
--
A
Q
-
T
-
L
P
E
D
A
-
L
P
Q
P
M
-----
L
N
L
-
M
D
M
P
-
G
Y
R
-----
K
A
F
K
A
I
K
-
S
L
I
T
D
-------
V
S
E
T
H
-------
K
I
S
---------
A
E
L
----
L
A
S
R
R
Q
I
N
Q
L
L
N
W
H
W
--
K
L
K
P
Q
N
N
L
P
-------
E
------------
L
I
S
G
W
R
--
G
E
L
M
A
E
A
L
H
N
L
L
Q
EYPQ-------
25
Fugue
53.52
19%
-55
- C2 -
4CFP
3
MLTC_ECOLI
A:
[15-341]
-------------------------------------------------------------
D
T
N
G
F
D
I
L
M
G
Q
F
A
H
N
-
I
E
-
N
I
W
G
F
K
E
V
-----------------------------
V
I
A
-
G
P
----
K
D
Y
V
K
Y
-
T
---
D
Q
Y
Q
T
R
S
H
I
N
F
D
D
G
T
I
T
I
E
----
T
I
A
G
T
E
P
A
A
H
L
R
R
A
I
I
K
T
L
L
M
G
D
------
D
--
P
S
S
V
D
-
L
Y
S
D
V
D
D
I
T
I
S
K
--
E
P
F
L
Y
G
Q
V
V
--------
D
N
T
G
Q
P
I
R
W
E
G
R
A
S
N
F
A
D
Y
L
L
-
K
N
R
L
K
S
R
S
----
N
G
L
R
I
I
Y
S
V
T
I
N
---
M
V
P
N
H
L
D
K
R
A
H
K
Y
L
G
M
V
R
Q
A
S
R
K
Y
G
V
D
-
E
S
L
I
L
A
I
M
Q
T
Q
S
S
----------------
F
N
P
--
Y
A
-----------------------------------------
V
S
R
S
D
A
--------------
L
G
L
M
Q
V
V
Q
H
----------
T
A
-
G
K
D
V
----------------
F
R
S
Q
------------
G
K
S
G
----
T
P
S
R
S
F
L
F
------
D
P
--
A
S
N
I
D
T
--
G
T
-
A
-
Y
L
A
M
L
-
N
N
------
V
Y
L
G
G
-
I
----
D
N
P
-----
T
S
-
R
R
Y
A
-
V
I
T
A
Y
-------
N
G
G
A
G
-------
S
V
L
---------
R
V
F
----
S
N
D
K
I
Q
A
A
N
I
I
N
T
M
T
--
P
G
D
V
Y
Q
T
L
T
T
R
-
H
P
S
A
E
------------
S
R
R
--
Y
--
L
Y
K
V
N
T
A
Q
K
S
Y
R
R
R----------
22
Fugue
45.08
10%
-36
- C5 -
3AYV
3
?
A:
[1-241]
----------------------------------------------------------------------------------------------------------------------------------
M
D
V
-
R
L
A
F
P
L
S
R
A
E
E
A
L
P
R
L
Q
A
L
G
L
G
A
----
E
V
Y
L
D
P
A
L
L
E
E
D
A
L
F
Q
S
L
R
R
R
F
S
------
G
----
K
L
S
-
V
H
L
P
F
W
N
L
D
L
L
S
PD
P
E
V
R
-
G
L
T
L
R
R
L
L
F
G
L
D
R
A
A
E
L
G
A
---
D
R
A
V
F
H
S
-----------
G
I
P
H
G
R
T
P
E
E
A
L
E
R
A
L
P
L
A
E
A
L
-
G
L
V
V
R
R
A
R
T
L
G
V
R
L
L
L
E
N
S
H
E
P
H
P
E
-
A
--
L
R
P
V
L
E
A
H
-
A
G
E
L
G
F
C
-
F
D
A
--
A
H
A
R
V
F
S
-
R
T
----------------------------------------------------------------
P
D
P
G
P
W
L
--
A
L
------
A
P
-
E
H
L
H
----------------
L
N
D
T
--
D
G
V
--
Y
D
R
H
-
W
N
L
G
RGVL
G
H
G
A
W
L
R
P
Y
L
D
R
T
-
M
V
--
L
E
V
R
E
D
--
P
E
-
A
-
S
L
A
F
L
-
Q
A
L
A
G
E
------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
44.95
8%
-24
- C5 -
3IUK
2
?
A:
[11-562]
VRPKS
A
I
D
A
V
A
D
A
Y
T
E
K
L
I
E
L
N
P
S
F
A
T
T
L
G
L
P
G
H
E
T
E
Y
Q
D
Y
S
P
A
G
A
A
A
H
A
E
A
T
R
L
A
L
E
A
L
A
G
L
E
P
S
D
D
V
D
A
V
T
L
D
A
M
R
E
-
R
L
G
L
E
L
E
I
H
Q
S
G
W
D
A
A
D
L
N
N
I
A
---
S
--
P
A
Q
D
-
I
R
A
I
F
D
L
M
P
T
D
T
-
V
E
H
W
E
H
I
-
A
G
R
A
A
N
V
P
G
A
I
E
-
G
Y
I
A
S
L
R
A
A
K
----
D
D
R
K
V
A
A
A
R
Q
I
R
I
V
I
E
Q
T
G
R
Y
A
A
EDG
F
F
A
K
M
A
A
D
A
S
L
-
G
D
A
P
L
P
A
E
V
Q
D
K
--
L
D
A
G
-
T
S
A
A
R
S
A
Y
S
A
L
G
A
F
L
R
D
E
L
---
L
P
V
A
P
E
K
D
A
V
G
-
R
E
R
Y
S
L
A
S
R
S
F
I
G
A
E
V
D
L
E
E
T
Y
A
W
G
V
Q
E
L
E
R
L
I
S
E
Q
E
K
V
A
G
Q
I
K
P
G
A
S
I
E
E
A
K
S
-
I
L
N
N
D
P
A
R
Q
I
K
G
T
D
A
L
K
A
W
M
Q
E
L
--
S
D
R
A
V
S
E
-
L
A
D
VHFDIPDVMK
T
L
E
C
M
I
A
PTDEG
G
I
Y
Y
T
G
P
S
DDFSR
P
G
R
M
W
W
S
V
P
A
G
E
D
---------
T
F
T
T
W
S
E
T
T
T
V
F
H
--
E
G
VPG
H
H
L
Q
V
-
A
T
A
T
----------------
Y
R
R
E
L
L
N
N
W
--
R
R
N
V
-
C
W
V
S
----
G
H
G
E
G
W
A
L
Y
A
E
Q
L
M
L
E
--
L
G
Y
L
K
D
P
G
D
H
M
G
M
L
D
G
Q
R
M
R
A
A
R
V
V
F
D
I
G
V
H
L
E
L
P
V
P
-
E
R
W
GTGTW
T
P
-
E
K
G
F
-
D
F
L
K
A
-------
N
L
D
I
S
-------
E
G
Q
L
---
Q
F
E
F
T
R
Y
L
G
W
PG
Q
A
P
S
Y
K
V
G
Q
R
L
W
E
Q
I
--
R
A
E
L
E
S
R
E
G
F
D
L
K
S
F
H
S
------------
K
A
L
--
N
--
I
G
S
V
G
L
D
V
L
R
R
A
L
L----------
23
Fugue
43.56
18%
-5
- C3 -
1QOY
-
HLYE_ECOLI
A:
[-4-298]
----------------------------------------
S
M
A
E
I
V
A
D
K
T
V
E
V
V
K
N
A
I
E
T
A
D
G
A
L
D
L
Y
N
K
Y
L
D
Q
V
I
----
P
W
Q
T
F
D
E
T
I
K
E
L
S
R
F
K
Q
E
Y
S
Q
A
---
A
--
S
V
L
V
-
G
D
I
K
T
L
L
-
M
D
S
Q
-
D
-
K
Y
F
E
A
-
T
Q
T
V
Y
E
W
C
G
V
A
-
T
Q
L
L
A
A
Y
I
L
L
F
DEYN
E
K
K
A
S
A
Q
K
D
I
L
I
K
V
L
D
D
G
I
T
K
L
N
------
E
-
A
Q
K
S
L
L
-
V
S
S
Q
S
F
N
N
A
S
G
K
--
L
L
A
L
-
D
S
Q
L
T
N
D
F
------------------------------------------------------------
S
E
K
S
S
Y
F
Q
S
Q
V
D
K
I
R
K
E
A
Y
A
-
G
A
A
A
G
V
V
V
G
---------
P
-
F
G
L
-------------------------------------------------------------------------------------------------------------------------------------------------
I
I
S
Y
S
I
A
A
-
G
V
--
V
E
G
K
L
I
--
P
E
-
L
-
K
-
N
K
L
-
K
S
V
Q
N
F
F
T
T
L
S
N
T
-
V
K
Q
A
-
N
K
D
-----
I
D
-
A
A
K
L
-
K
L
T
T
E
-------
I
A
A
I
G
-------
E
I
K
T
---
E
T
E
T
T
R
F
Y
----
V
D
Y
-----
D
D
L
M
L
S
L
--
L
K
E
A
A
K
K
M
I
---
N
T
C
N
E
------------
Y
Q
K
--
R
--
H
G
K
K
T
L
F
-----------------
9
HHSearch
40.88
12%
-28
- C4 -
2ESN
-
?
A:
[4-75]
-----------------------------------------
L
L
R
R
L
D
L
N
L
L
L
V
F
D
A
L
Y
R
H
R
N
--
V
G
T
A
A
S
E
L
A
-----
I
-
S
A
S
A
F
S
H
A
L
G
R
L
R
Q
G
L
D
D
E
L
F
L
R
Q
G
N
--
R
M
Q
P
-
T
Q
R
A
E
H
L
-
A
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
39.24
13%
-30
- C4 -
3ISP
-
Y1985_MYCTU
A:
[5-70]
--------------------------------------------
Q
L
D
G
P
Q
L
A
A
L
A
A
V
V
E
L
G
S
--
F
D
A
A
A
E
R
L
H
-----
V
-
T
P
S
A
V
S
Q
R
I
K
S
L
E
Q
Q
V
G
Q
V
L
V
V
---
R
EK
P
C
R
A
-
T
T
A
G
I
P
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
Fugue
37.83
19%
1
- C4 -
2LN3
-
?
A:
[1-83]
----------------------------------------------------------------------------------
M
G
L
T
R
T
I
T
S
Q
N
K
E
E
L
L
E
I
A
L
---
K
--
F
I
S
Q
G
L
D
L
E
V
E
F
-
D
S
T
D
-
D
K
E
I
E
E
F
-
E
R
D
M
E
D
L
A
K
K
T
G
V
Q
I
Q
K
Q
W
Q
G
N
K
----
L
R
I
R
L
K
G
S
L
E
H
H
H
H
H
H
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
HHSearch
37.48
11%
14
- C4 -
2RBD
1
?
A:
[14-77]
----------------------------
L
H
Y
G
E
V
F
S
T
W
T
Y
L
S
T
N
N
G
L
I
N
G
Y
R
S
F
I
N
H
T
G
D
E
--
D
----
L
K
N
L
I
D
E
A
-
I
Q
-
A
M
Q
D
E
N
H
Q
L
E
E
L
L
R
S
N
G
V
G
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
HHSearch
36.04
11%
-3
- C4 -
1S99
2
YKOF_BACSU
A:
[26-175]
-------------------------------
S
V
I
K
S
A
L
A
A
T
D
T
S
K
V
W
T
K
T
D
H
I
S
T
V
L
R
G
S
--------
I
D
H
----
V
-
F
D
-
A
A
K
A
I
Y
L
H
A
A
---
N
S
E
Q
H
I
V
M
N
---
G
--
T
F
S
I
-
G
C
P
G
D
T
Q
-
G
D
T
Y
L---
D
K
R
V
--
N
--
E
D
A
V
R
G
L
K
A
E
A
P
C
Q
F
A
L
-
Y
----
P
M
N
E
P
D
-
Y
M
G
L
I
M
E
A
V
D
I
A
K
A
-
Q
------
G
-
T
F
V
Q
G
V
H
Y
A
S
E
L
D
G
-
D
A
H
D
--
V
F
S
T
-
L
E
A
V
F
R
M
A
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
HHSearch
32.60
11%
101
* C4 *
1LXN
-
Y1187_METTH
A:
[20-47]
-------------------------------
S
Y
V
A
A
A
V
E
A
L
K
K
L
N
V
R
Y
E
I
S
G
M
G
T
L
L
E
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
27.30
24%
3
- C4 -
2OXN
1
NAGZ_VIBCH
A:
[107-168]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
H
D
--
V
D
L
S
F
A
P
-
V
L
D
-----------------------------------------
M
G
F
A
-
C
K
---------
A
---
I
G
N
R
A
F
G
E
D
V
-
Q
T
------
V
L
K
H
S
S
A
----------------
F
L
R
G
M
K
A
V
G
--
M
A
T
T
G
K
H
F
P
----
G
H
G
A
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
26.55
45%
44
- C4 -
1OGD
1
RBSD_BACSU
A:
[26-67]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
A
D
A
G
L
P
V
P
-
D
G
V
L
K
I
D
L
S
L
K
P
G
L
P
A
-----------------------------------------
F
Q
D
T
A
A
V
---------
L
A
E
E
M
A
V
E
K
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
26.44
45%
47
- C4 -
1OGF
1
RBSD_BACSU
A:
[26-67]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
A
D
A
G
L
P
V
P
-
D
G
V
L
K
I
D
L
S
L
K
P
G
L
P
A
-----------------------------------------
F
Q
D
T
A
A
V
---------
L
A
E
E
M
A
V
E
K
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
25.53
45%
56
- C4 -
1OGE
1
RBSD_BACSU
A:
[26-67]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
A
D
A
G
L
P
V
P
-
D
G
V
L
K
I
D
L
S
L
K
P
G
L
P
A
-----------------------------------------
F
Q
D
T
A
A
V
---------
L
A
E
E
M
A
V
E
K
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
25.31
45%
49
- C4 -
1OGC
-
RBSD_BACSU
A:
[26-67]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
A
D
A
G
L
P
V
P
-
D
G
V
L
K
I
D
L
S
L
K
P
G
L
P
A
-----------------------------------------
F
Q
D
T
A
A
V
---------
L
A
E
E
M
A
V
E
K
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------