@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1961: (2016-03-30 )
LPNEVYDVTIIGGGPIGLFSAFYSGLRSMKTKIIDAEPAVGGKVRYFFPEKIIRDIGGIPAITGENLVANLKQQAETFHPTIVCSERVVDVTKLADGTFQLTSHNGSIHFSKTIVIATGSGTFEVNKLEALHAEDFPFAIHYDVKNIEQFRDKVVVVSGGGNSAIDWAQTLEPIAKKVHLIYRGEDFKAHEESVRELKNSRVEIHIHHEISELIGTNNQLTEITVCCNQTQTTKTIETEALFINHGVKVDLGTMAEWGFKQADFGIVVDDEMKTTVPGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG

Atome Classification :

(20 SA) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20........30......----.----..----40........50........60.-........70........80........90..--..--.--.--..100.---......110.......120....-.-..130...----.--.-..-140-....---.---.-.--------150.......160.......170.......180.......190--.---.-.-...-.-.-.-200--.----........210.......--220.......230.......240--.......250.....----...260.-..-....270........280.......290.......300.......310.......320.......330
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPNEVYDVTIIGGGPIGLFSAFYSGLRSMK-TKIIDA----E----PA----VGGKVRYFFPEKIIRDIGGIP-A-ITGENLVANLKQQAETFHPTIVCSERVVDVTK--LA--D--G--TFQLTS---HNGSIHFSKTIVIATGSGTFEVN-K-LEALHAED----F--P-FA-IHY-DVKN---I---E-Q--------FRDKVVVVSGGGNSAIDWAQTLEPIAKKVHLIYRGEDFKAH----E---E-S-VRE-L-K-N-S----R----VEIHIHHEISELIGTNNQ--LTEITVCCNQTQTTKTIETEALF--INHGVKVD-LGTMAE----WGFKQAD-FG-IVVDD-EMKTTVPGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG
62 HHSearch 97.2841%-102 - C3 -3LZW FENR2_BACSU A:[4-327] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTKVYDITIIGGGPVGLFTAFYGGMRQAS-VKIIES----L----PQ----LGGQLSALYPEKYIYDVAGFP-K-IRAQELINNLKEQMAKFDQTICLEQAVESVEK--QA--D--G--VFKLVT---N-EETHYSKTVIITAGNGAFKPR-K-LELENAEQ----Y--EGKN-LHY-FVDD---L---Q-K--------FAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH----E---H-S-VEN-L-H-A-S----K----VNVLTPFVPAELIGE-DK--IEQLVLEEVKGDRKEILEIDDLI--VNYGFVSS-LGPIKN----WGLDIEK-NS-IVVKS-TMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKARVQPLHSTS------
1 PsiBlast_PDB 95.7940%-102 - C3 -3LZW FENR2_BACSU A:[6-326] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVYDITIIGGGPVGLFTAFYGGMRQAS-VKIIES----L----PQ----LGGQLSALYPEKYIYDVAGFP-K-IRAQELINNLKEQMAKFDQTICLEQAVESVEK--QA--D--G--VFKLVT----NEETHYSKTVIITAGNGAFKPR-K-LELENAEQ----Y--E-GKNLHY-FVDD---L---Q-K--------FAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH----E---H-S-VEN-L-H-A-S----K----VNVLTPFVPAELIG-EDK--IEQLVLEEVKGDRKEILEIDDLI--VNYGFVSS-LGPIKN----WGLDIEK-NS-IVVKS-TMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKARVQPLHST-------
21 PsiBlast_CBE 95.6540%-102 - C3 -3LZX FENR2_BACSU B:[6-326] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVYDITIIGGGPVGLFTAFYGGMRQAS-VKIIES----L----PQ----LGGQLSALYPEKYIYDVAGFP-K-IRAQELINNLKEQMAKFDQTICLEQAVESVEK--QA--D--G--VFKLVT----NEETHYSKTVIITAGNGAFKPR-K-LELENAEQ----Y--E-GKNLHY-FVDD---L---Q-K--------FAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH----E---H-S-VEN-L-H-A-S----K----VNVLTPFVPAELIG-EDK--IEQLVLEEVKGDRKEILEIDDLI--VNYGFVSS-LGPIKN----WGLDIEK-NS-IVVKS-TMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKARVQPLHST-------
2 PsiBlast_PDB 95.4240%-100 - C3 -3LZX FENR2_BACSU A:[6-326] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVYDITIIGGGPVGLFTAFYGGMRQAS-VKIIES----L----PQ----LGGQLSALYPEKYIYDVAGFP-K-IRAQELINNLKEQMAKFDQTICLEQAVESVEK--QA--D--G--VFKLVT----NEETHYSKTVIITAGNGAFKPR-K-LELENAEQ----Y--E-GKNLHY-FVDD---L---Q-K--------FAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH----E---H-S-VEN-L-H-A-S----K----VNVLTPFVPAELIG-EDK--IEQLVLEEVKGDRKEILEIDDLI--VNYGFVSS-LGPIKN----WGLDIEK-NS-IVVKS-TMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKARVQPLHST-------
22 PsiBlast_CBE 92.9636% -97 - C3 -3AB1 FENR_CHLTE B:[13-329] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DMRDLTIIGGGPTGIFAAFQCGMNNIS-CRIIES----M----PQ----LGGQLAALYPEKHIYDVAGFP-E-VPAIDLVESLWAQAERYNPDVVLNETVTKYTK--LD--D--G--TFETRT---NTGNVYRSRAVLIAAGLGAFEPR-K-LPQLGNID----HLTG-SS-VYY-AVKS---V---E-D--------FKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH----G---K-T-AHE-V-E-R-A----RANGTIDVYLETEVASIEESNGV--LTRVHLRSSD-GSKWTVEADRLL--ILIGFKSN-LGPLAR----WDLELYE-NA-LVVDS-HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKP-----------------
3 PsiBlast_PDB 92.7136% -99 - C3 -3AB1 FENR_CHLTE A:[13-329] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DMRDLTIIGGGPTGIFAAFQCGMNNIS-CRIIES----M----PQ----LGGQLAALYPEKHIYDVAGFP-E-VPAIDLVESLWAQAERYNPDVVLNETVTKYTK--LD--D--G--TFETRT---NTGNVYRSRAVLIAAGLGAFEPR-K-LPQLGNID----HLTG-SS-VYY-AVKS---V---E-D--------FKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH----G---K-T-AHE-V-E-R-A----RANGTIDVYLETEVASIEESNGV--LTRVHLRSSD-GSKWTVEADRLL--ILIGFKSN-LGPLAR----WDLELYE-NA-LVVDS-HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKP-----------------
64 HHSearch 90.6236% -96 - C3 -3AB1 FENR_CHLTE A:[13-330] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DMRDLTIIGGGPTGIFAAFQCGMNNIS-CRIIES----M----PQ----LGGQLAALYPEKHIYDVAGFP-E-VPAIDLVESLWAQAERYNPDVVLNETVTKYTK--LD--D--G--TFETRT---NTGNVYRSRAVLIAAGLGAFEPR-KLPQLGNIDH----L--TGSS-VYY-AVKS---V---E-D--------FKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTAH---E-V-ERA-R-A-N-G----T----IDVYLETEVASIEESNGV--LTRVHLRSSD-GSKWTVEADRLL--ILIGFKSN-LGPLAR----WDLELYE-NA-LVVDS-HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPG----------------
4 PsiBlast_PDB 88.6335%-104 - C3 -2ZBW FENR_THET8 A:[7-304] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVLIVGAGPTGLFAGFYVGMRGLS-FRFVDP----L----PE----PGGQLTALYPEKYIYDVAGFP-K-VYAKDLVKGLVEQVAPFNPVYSLGERAETLER--EG--D-----LFKVTT---SQGNAYTAKAVIIAAGVGAFEPR-R-IGAPGERE----F--EGRG-VYY-AVKS---K---A-E--------FQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH----E---A-S-VKE-L-M-K-AHEEGR----LEVLTPYELRRVEG-DER--VRWAVVFHNQTQEELALEVDAVL--ILAGYITK-LGPLAN----WGLALEK-NK-IKVDT-TMATSIPGVYACGDIVTYPGKLPLIVLGFGE-------------------------------
63 HHSearch 87.5433% -87 - C3 -2ZBW FENR_THET8 A:[3-329] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADHTDVLIVGAGPTGLFAGFYVGMRGLS-FRFVDP----L----PE----PGGQLTALYPEKYIYDVAGFP-K-VYAKDLVKGLVEQVAPFNPVYSLGERAETLER--EG-----D--LFKVTT---SQGNAYTAKAVIIAAGVGAFEPR-R-IGAPGERE----F--EGRG-VYY-AVKS---K---A-E--------FQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVK---E-L-MKA-H-E-E-G----R----LEVLTPYELRRVEGDERV--RWAVVFHNQ-TQEELALEVDAVL--ILAGYITK-LGPLAN----WGLALEK-NK-IKVDT-TMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANPALKVNPGHSSE------
82 Fugue 83.2623% -90 - C3 -1HYU AHPF_SALTY A:[1-521] MLDTNMKTQLRAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNTLPVRKPSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRDAYDVLIVGSGPAGAAAAVYSARKGIR-TGLMGE----R----F------GGQVL---DTVDIENYISVP-K-TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATE--G--G--LHQIET---ASGAVLKARSIIIATG---AKWR-N-MNVPGEDQ----YR-T-KG-VTYCPHCD---G---P-L--------FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD----Q---V-L-QDK-V-RSL-K----N----VDIILNAQTTEVKGDGSK--VVGLEYRDRVSGDIHSVALAGIF--VQIGLLPN-THWLEG----ALERNRM-GE-IIIDA-KCETSVKGVFAAGDCTTVPY--KQIIIATGEGAKASLSAFDYLIRTKIA-------------
67 HHSearch 82.7125%-103 - C3 -1FL2 AHPF_ECOLI A:[1-307] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AYDVLIVGSGPAGAAAAIYSARKGIR-TGLMGE----------R----FGGQILDTVD---IENYISVP-K-TEGQKLAGALKVHVDEYDVDVIDSQSASKLIP--AAVEG--G--LHQIET---ASGAVLKARSIIVATGA---KWR-N-MNVPGEDQ----Y--RTKG-VTY-CPHC---DG--P-L--------FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD----Q---V-L-QDK-L-R-SLK----N----VDIILNAQTTEVKGDGSK--VVGLEYRDRVSGDIHNIELAGIF--VQIGLLPN-TNWLEG-----AVERNRMGE-IIIDA-KCETNVKGVFAAGDCTTVPY--KQIIIATGEGAKASLSAFDYLIRT----------------
76 HHSearch 82.0424%-100 - C3 -1HYU AHPF_SALTY A:[209-518] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRDAYDVLIVGSGPAGAAAAVYSARKGIR-TGLMGE----R----------FGGQVLDTVD---IENYISVP-K-TEGQKLAGALKAHVSDYDVDVIDSQSASKLVP--AATEG--G--LHQIET---ASGAVLKARSIIIATGA---KWR-N-MNVPGEDQ----Y--RTKG-VTY-CPHC---DG--P-L--------FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD----Q---V-L-QDK-V-R-SLK----N----VDIILNAQTTEVKGDGSK--VVGLEYRDRVSGDIHSVALAGIF--VQIGLLPN-THWLEG-----ALERNRMGE-IIIDA-KCETSVKGVFAAGDCTTVP--YKQIIIATGEGAKASLSAFDYLIRT----------------
20 PsiBlast_PDB 81.5326% -97 - C3 -4YKF ? A:[211-515] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAYDVLIVGSGPAGAAAAIYSARKGIR-TGLMGE----R----------FGGQI---LDTVDIENYISVP-K-TEGQKLAGALKVHVDEYDVDVIDSQSASKLIP--AAVEG--G--LHQIET---ASGAVLKARSIIVATGAKWRNMN---------------V--P-GE-DQY-RTKG---V---T-YCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD----QVLQD-K-LRS-L-K-N-----------VDIILNAQTTEVKGDGSK--VVGLEYRDRVSGDIHNIELAGIF--VQIGLLPN-TNWL-E----GAVERNR-MGEIIIDA-KCETNVKGVFAAGDCTTVPYKQIIIATG--EGAKASLSAFDYL-------------------
19 PsiBlast_PDB 80.4926% -98 - C3 -1HYU AHPF_SALTY A:[210-515] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDAYDVLIVGSGPAGAAAAVYSARKGIR-TGLMGE----R----------FGGQV---LDTVDIENYISVP-K-TEGQKLAGALKAHVSDYDVDVIDSQSASKLVP--AA--TEGG--LHQIET---ASGAVLKARSIIIATGAKWRNMN---------------V--P-GE-DQY-RTKG---V---T-YCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD----QVLQD-K-VRS-L-K-N-----------VDIILNAQTTEVKGDGSK--VVGLEYRDRVSGDIHSVALAGIF--VQIGLLPN-THWL-E----GALERNR-MGEIIIDA-KCETSVKGVFAAGDCTTVPYKQIIIATG--EGAKASLSAFDYL-------------------
73 HHSearch 80.4026% -93 - C3 -2Q7V ? A:[5-313] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAHDYDVVIIGGGPAGLTAAIYTGRAQLS-TLILEK----G----M-----PGGQIAWSE--E-VENFPGFPEP-IAGMELAQRMHQQAEKFGAKVEM-DEVQGVQH--DA--TS-HPYPFTVRG---Y-NGEYRAKAVILATGA---DPR-K-LGIPGEDN----F--WGKG-VST-CATC---DG--F-F--------YKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRANK---V---A-Q-ARA-F-A-N-P----K----MKFIWDTAVEEIQGA-DS--VSGVKLRNLKTGEVSELATDGVF--IFIGHVPN-TAFVKD-----TVSLRDDGY-VDVRD-EIYTNIPMLFAAGDVSDYIY--RQLATSVGAGTRAAMMTERQLAA-----------------
66 HHSearch 79.6125%-108 * C3 *3R9U ? A:[1-314] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK----G----M-----PGGQITSSS---EIENYPGVA-QVMDGISFMAPWSEQCMRFGLKH-EMVGVEQILK--NS--D--G--SFTIKL---EGGKTELAKAVIVCTGS---APK-K-AGFKGEDE----F--FGKG-VST-CATC---D---GFF--------YKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAA----P---S-T-VEKVK-K-N-E----K----IELITSASVDEVYGDKMG--VAGVKVKLK-DGSIRDLNVPGIF--TFVGLNVR-NEILKQDDSKFLCNMEEGGQ-VSVDL-KMQTSVAGLFAAGDLRKDA--PKQVICAAGDGAVAALSAMAYIESL----------------
71 HHSearch 78.9125% -89 - C3 -1VDC TRXB1_ARATH A:[4-324] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LETHNTRLCIVGSGPAAHTAAIYAARAELK-PLLFEG----WMANDIA----PGGQLTTTTD---VENFPGFPEG-ILGVELTDKFRKQSERFGTTI-FTETVTKVDF--SS-----K--PFKLFT---D-SKAILADAVILAIGA---VAK-R-LSFVGSGEVLGGF--WNRG-ISA-CAVCDGAA---P-I--------FRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRAS----K---I-MQQRA-L-S-N-P----K----IDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLF--FAIGHEPA-TKFLDG-----GVELDSDGY-VVTKPGTTQTSVPGVFAAGDVQDKKY--RQAITAAGTGCMAALDAEHYLQE-----------------
8 PsiBlast_PDB 78.7328% -78 - C3 -4CCQ ? A:[2-312] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNIHDVVIIGSGPAAHTAAIYLGRSSLK-PVMYEGFMAGG----VA----AGGQLT---TTTIIENFPGFPNG-IDGNELMMNMRTQSEKYGTTII--TETIDHVD--FS--T--Q--PFKLFT---EEGKEVLTKSVIIATGATAKRMHVP-GEDKYWQN----G--V-SA-CAI-CDGA---V---P-I--------FRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRAS----K---TMQ-ERV-L-N-H-P----K----IEVIWNSELVELEGDGDL--LNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQV--------KTAD-DG-YILTE-GPKTSVDGVFACGDVCDRVYRQAIVAAG--SGCMAALSCEKWLQ------------------
7 PsiBlast_PDB 78.0328% -80 - C3 -4CBQ ? A:[3-312] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NIHDVVIIGSGPAAHTAAIYLGRSSLK-PVMYEGFMAGG----VA----AGGQLT---TTTIIENFPGFPNG-IDGNELMMNMRTQSEKYGTTII--TETIDHVD--FS--T--Q--PFKLFT---EEGKEVLTKSVIIATGATAKRMHVP-GEDKYWQN----G--V-SA-CAI-CDGA---V---P-I--------FRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRAS----K---TMQ-ERV-L-N-H-P----K----IEVIWNSELVELEGDGDL--LNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQV--------KTAD-DG-YILTE-GPKTSVDGVFACGDVCDRVYRQAIVAAG--SGCMAALSCEKWLQ------------------
70 HHSearch 77.9925% -94 - C3 -3ITJ TRXB1_YEAST A:[21-336] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VHNKVTIIGSGPAAHTAAIYLARAEIK-PILYEG----M----MANGIAAGGQLTTTT---EIENFPGFPDG-LTGSELMDRMREQSTKFGTEI-ITETVSKVDL--SS-----K--PFKLWTEFNEDAEPVTTDAIILATGA---SAK-R-MHLPGEET----Y--WQKG-ISA-CAVC---DGAVP-I--------FRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRAS----T---I-M-QKR-AEK-N-E----K----IEILYNTVALEAKGDGKL--LNALRIKNTKKNEETDLPVSGLF--YAIGHTPA-TKIVAG-----QVDTDEAGY-IKTVPGSSLTSVPGFFAAGDVQDSKY--RQAITSAGSGCMAALDAEKYLTS-----------------